New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1144390 =74 (1.030)8 (0.120) 8/250 NT 9.8% coding (296/414 nt) PP_1004 hypothetical protein
?NC_002947 1144443 = 79 (1.180)coding (243/414 nt) PP_1004 hypothetical protein

GTGCCGCGCTGGCGGCCTACGCCTTGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACT  >  NC_002947/1144243‑1144538
                                                                                                                                                   |                                                                                                                                                           
gtgCCGCGCTGGCGGCCTACGCCTTGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGaaa                                                                                                                                                            <  1:239931/149‑1 (MQ=255)
 gcttgccgaccaccgagttcatcctgctggccgcctgggccgccacacgcagttcaccgcgcctgtcggcatggctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAg                                                                                                                                                           >  8:119251‑M1/147‑149 (MQ=255)
   ccGCGCTGGCGGCCTACGCCTTGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGt                                                                                                                                                         >  7:266826/1‑149 (MQ=255)
   ccGCGCTGGCGGCCTACGCCTTGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGt                                                                                                                                                         >  7:236051/1‑149 (MQ=255)
    cgcgCTGGCGGCCTACGCCTTGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTc                                                                                                                                                        <  2:399768/149‑1 (MQ=255)
      ccgaccaccgagttcatcctgctggccgcctgggccgccacacgcagttcaccgcgcctgtcggcatggctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAGGTCAg                                                                                                                                                      <  3:172347‑M1/8‑1 (MQ=255)
      ccgaccaccgagttcatcctgctggccgcctgggccgccacacgcagttcaccgcgcctgtcggcatggctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAGGTCAg                                                                                                                                                      >  6:103147‑M1/142‑149 (MQ=255)
         tGGCGGCCAACGCCTTGTATTCAGGGCTGCTGAGCTTCTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑At                                                                                                                                             >  5:289242/1‑149 (MQ=255)
         tGGCGGAGTTCGCCTTGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑At                                                                                                                                             <  1:369371/149‑1 (MQ=255)
             ggcCTACGCCTTGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAgg                                                                                                                                         >  6:242933/1‑149 (MQ=255)
                   tcatcctgctggccgcctgggccgccacacgcagttcaccgcgcctgtcggcatggctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAGGTCAGC‑‑‑‑‑‑ATCAGGCCcgcg                                                                                                                                   <  7:118748‑M1/21‑1 (MQ=255)
                      cTTGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGca                                                                                                                                 >  6:393330/1‑148 (MQ=255)
                       ttGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGca                                                                                                                                 <  2:76788/147‑1 (MQ=255)
                       ttGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGca                                                                                                                                 >  1:76788/1‑147 (MQ=255)
                         gTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCcg                                                                                                                                     <  6:261837/141‑1 (MQ=255)
                         gTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCcg                                                                                                                                     >  5:261837/1‑141 (MQ=255)
                            ttCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCAGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCAcagcag                                                                                                                           >  7:275079/1‑148 (MQ=255)
                             tCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACagcagc                                                                                                                          <  8:266826/148‑1 (MQ=255)
                                cgcctgggccgccacacgcagttcaccgcgcctgtcggcatggctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGc                                                                                                                      <  6:239814‑M1/34‑1 (MQ=255)
                                 ggCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCt                                                                                                                     >  4:362713/1‑149 (MQ=255)
                                        gagaTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTACAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCCCACAGCAGCATGCTGATgg                                                                                                                >  3:69037/1‑147 (MQ=255)
                                        gAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGtt                                                                                                              >  4:57666/1‑149 (MQ=255)
                                         aGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTg                                                                                                             <  6:291696/149‑1 (MQ=255)
                                              cacgcagttcaccgcgcctgtcggcatggctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAGGTCAGCGCAACCATCAGGCCCGCGCACAGCAGCATGCTGATGGtt                                                                                                              >  3:313022‑M1/102‑149 (MQ=255)
                                                 aCGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGAcc                                                                                                     >  3:148591/1‑149 (MQ=255)
                                                   agttcaccgcgcctgtcggcatggctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCtt                                                                                                   >  5:239814‑M1/97‑149 (MQ=255)
                                                       cagggcaggCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGcc                                                                                               >  2:141258/1‑149 (MQ=255)
                                                       caccgcgcctgtcggcatggctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGc                                                                                                >  8:118748‑M1/93‑148 (MQ=255)
                                                        accgcgcctgtcggcatggctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAGGGCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGccc                                                                                              >  5:366940‑M1/92‑149 (MQ=255)
                                                         gggcaggCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCg                                                                                             <  6:216108/149‑1 (MQ=255)
                                                            caggcaTGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGgcg                                                                                          >  5:66277/1‑149 (MQ=255)
                                                            caggcaTGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCGGACCTTGGCCCGgcg                                                                                          <  3:57666/149‑1 (MQ=255)
                                                             aggcaTGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGACAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCg                                                                                             <  3:62970/145‑1 (MQ=255)
                                                             aggcaTGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGACAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCg                                                                                             >  4:62970/1‑145 (MQ=255)
                                                                caTGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTgg                                                                                      <  8:135667/149‑1 (MQ=255)
                                                                 aTGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGa                                                                                     <  4:79966/149‑1 (MQ=255)
                                                                   gTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGAt                                                                                    >  4:182026/1‑148 (MQ=255)
                                                                    ttCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATc                                                                                   <  2:155729/148‑1 (MQ=255)
                                                                    ttCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCa                                                                                  <  8:236051/149‑1 (MQ=255)
                                                                      ccGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCAcc                                                                                >  8:341170/1‑149 (MQ=255)
                                                                          gctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTgg                                                                                                 >  8:31396‑M1/74‑128 (MQ=255)
                                                                          gctggagaaccaccggctgttcgggccaattctgcataactggcgcaacggcaaggtgatccagcgccgggccAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTgg                                                                                                 <  7:31396‑M1/55‑1 (MQ=255)
                                                                          gCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGc                                                                           >  5:156232/1‑149 (MQ=255)
                                                                            gTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTgg                                                                                      >  1:12067/1‑137 (MQ=255)
                                                                            gTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTgg                                                                                      <  2:12067/137‑1 (MQ=255)
                                                                              gACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCgat                                                                       >  6:167741/1‑147 (MQ=255)
                                                                               aCCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTg                                                                      >  6:3291/1‑149 (MQ=255)
                                                                                ccAGATCCACAGGTTGCCCAGGGTCATTCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTgc                                                                     <  8:275079/149‑1 (MQ=255)
                                                                                 cAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTgcg                                                                    <  5:242933/149‑1 (MQ=255)
                                                                                  aGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTgg                                                                                      <  2:87934/131‑1 (MQ=255)
                                                                                  aGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTgg                                                                                      >  1:87934/1‑131 (MQ=255)
                                                                                  aGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTgcgc                                                                   >  1:71501/1‑149 (MQ=255)
                                                                                      ccACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCAc                                                                                 >  1:281056/1‑132 (MQ=255)
                                                                                      ccACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCAc                                                                                 <  2:281056/132‑1 (MQ=255)
                                                                                      ccACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGt                                                               >  5:164776/1‑149 (MQ=255)
                                                                                        acaGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTa                                                             >  2:67026/1‑149 (MQ=255)
                                                                                         caGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTAt                                                            <  4:148313/149‑1 (MQ=255)
                                                                                           ggTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGc                                                          <  6:156232/149‑1 (MQ=255)
                                                                                            gTTGCCCAGGGTCATGCCGGCGATGGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACGTTGCCGTTGCGCCAGTTATGCa                                                         <  7:274195/149‑1 (MQ=255)
                                                                                                 ccAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAAtt                                                    <  3:362713/149‑1 (MQ=255)
                                                                                                  cAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTg                                                   >  2:358307/1‑149 (MQ=255)
                                                                                                  cAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTACCAGAAAGCTCAGC‑‑‑‑‑‑ATCAGGACCGCGCACAGCAGCAAGCTGATGGTTGCGCTCACCTAGGCCCGGCGCTGGATCACCTTGCAGATGCGCCAGTTATGCAGAATTg                                                   >  2:315316/1‑149 (MQ=255)
                                                                                                    gggTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGc                                                 <  5:3291/149‑1 (MQ=255)
                                                                                                     ggTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGcc                                                <  7:341170/149‑1 (MQ=255)
                                                                                                      gTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGccc                                               >  1:225982/1‑149 (MQ=255)
                                                                                                      gTCATGCCGGCGATTGCAAGGAATACCGGTCATTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGTGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCGCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGccc                                               <  4:69037/149‑1 (MQ=255)
                                                                                                       tCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCg                                              <  2:260202/149‑1 (MQ=255)
                                                                                                             cGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACGTTGGCCCGGCGCTGGATCACCTTGGCGTTGCGCCAGTTATGCAGAATTTGCCCGAACAGc                                        <  6:289242/149‑1 (MQ=255)
                                                                                                               gCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCg                                      >  5:175906/1‑149 (MQ=255)
                                                                                                                      ccAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCGGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTtc                               >  4:195280/1‑149 (MQ=255)
                                                                                                                      ccAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGTGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTtc                               >  4:172347/1‑149 (MQ=255)
                                                                                                                      ccAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTgg                                                  >  4:234381/1‑130 (MQ=255)
                                                                                                                      ccAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTgg                                                  <  3:234381/130‑1 (MQ=255)
                                                                                                                      ccAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGtt                                <  5:393330/148‑1 (MQ=255)
                                                                                                                      ccAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTtc                               >  2:105499/1‑149 (MQ=255)
                                                                                                                       cAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTtct                              >  1:250782/1‑149 (MQ=255)
                                                                                                                        aGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTtctc                             >  4:426687/1‑149 (MQ=255)
                                                                                                                          gAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTtctc                             >  7:307356/1‑147 (MQ=255)
                                                                                                                          gAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCa                           <  3:182026/149‑1 (MQ=255)
                                                                                                                           aaTACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACATCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTCTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCa                           <  1:326467/149‑1 (MQ=255)
                                                                                                                           aaTACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCAAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAg                          >  1:295953/1‑149 (MQ=255)
                                                                                                                             tACCGGCCAGTGATGTTCCAGAAAGGTCGGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGcc                        <  3:195280/149‑1 (MQ=255)
                                                                                                                                tcgCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATg                     >  8:219362/3‑149 (MQ=255)
                                                                                                                                cGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATg                     >  5:32186/1‑149 (MQ=255)
                                                                                                                                cGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCACGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATg                     >  6:269553/1‑149 (MQ=255)
                                                                                                                                 ggCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGc                    <  6:66277/149‑1 (MQ=255)
                                                                                                                                       tGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAg              >  4:171969/1‑149 (MQ=255)
                                                                                                                                         aTGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAgg             <  2:225982/148‑1 (MQ=255)
                                                                                                                                                aGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTg      >  1:22618/1‑148 (MQ=255)
                                                                                                                                                 gAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGaa    >  6:199415/1‑149 (MQ=255)
                                                                                                                                                   AAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACt  >  3:426687‑M1/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                           
GTGCCGCGCTGGCGGCCTACGCCTTGTATTCAGGGCTGCTGAGCTTGTGACGGGGCAGGGCAGGCATGTTCCGGGCGTGACCAGATCCACAGGTTGCCCAGGGTCATGCCGGCGATTGCCAGGAATACCGGCCAGTGATGTTCCAGAAAGGTCAGC‑‑‑‑‑‑ATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACT  >  NC_002947/1144243‑1144538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.