New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2147917	59 (0.820)	5 (0.070)	3/252	NT	7.9%	coding (2603/3276 nt)	rne	ribonuclease E
	?	NC_002947	= 2147951	61 (0.910)					coding (2569/3276 nt)	rne	ribonuclease E

TGCTCGACCGGTTGGGCGGCTTCGCTGTTGTCGGTTTCTGCAACGGCAGCGACTTCGGCGGTAGCACGCTCGGCCTGCTGGTTGGCCTGGGCTTCTGCGTCGGAGCTGATGTTGCTGCTGGCGACAGCAGCCGTCACGGCAAGGCCAGCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2147764‑2147917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagccaCAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGCCAGCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAAGTCGCTGCCGTT  <  NC_002947/2147951‑2147805                                                                                                                                                                                                                                                                                                               TGCTCGACCGGTTGGGCGGCTTCGCTGTTGTCGGTTTCTGCAACGGCAGCGACTTCGGCGGTAGCACGCTCGGCCTGCTGGTTGGCCTGGGCTTCTGCGTCGGAGCTGATGTTGCTGCTGGCGACAGCAGCCGTCACGGCAAGGCCAG                                                                                                                                                           >  7:342766/1‑148      GACCGGTTGGGCGGCTTCGCTGTTGTCGGTTTCTGCAACGGCAGCGACTTCGGCGGTAGCACGCTCGGCCTGCTGGTTGGCCTGGGCTTCTGCGTCGGAGCTGATGTTGCTGCTGGCGACAGCAGCCGTCACGGCAAGGCCAGCAGCCA                                                                                                                                                     <  2:155825/149‑1      GACCGGTTGGGCGGCTTCGCTGTTGTCGGTTTCTGCAACGGCAGCGACTTCGGCGGTAGCACGCTCGGCCTGCTGGTTGGCCTGGGCTTCTGCGTCGGAGCTGATGTTGCTGCTGGCGACAGCAGCCGTCACGGCAAGGCCAGCAGC                                                                                                                                                       <  8:41995/147‑1                                        GCAACGGCAGCGACTTCGGCGGTAGCACGCTCGGCCTGCTGGTTGGCCTGGGCTTCTGCGTCGGAGCTGATGTTGCTGCTGGCGACAGCAGCCGTCACGGCAAGGCCAGCAGCCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAAC                                                                                                                   >  5:399219/1‑149                                                AGCGACTTCGGCGGTAGCACGCTCGGCCTGCTGGTTGGCCTGGGCTTCTGCGTCGGAGCTGATGTTGCTGCTGGCGACAGCAGCCGTCACGGCAAGGCCAGCAGCCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCT                                                                                                           <  1:116057/149‑1                                                AGCGACTTCGGCGGGAGCACGCTCGGCCTGCTGGTTGGCCTGGGCTTCTGCGTCGGAGCTGATGTTGCTGCTGGCGACAGCAGCCGTCACGGCAAGGCCAGCAGCCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCT                                                                                                           <  1:110308/149‑1                                                 GCGACTTCGGCGGTAGCACGCTCGGCCTGCTGGTTGGCCTGGGCTTCTGCGTCGGAGCTGATGTTGCTGCTGGCGACAGCAGCCGTCACGGCAAGGCCAGCAGCCACAACAGCACCAGGCCACCGAGTTGGGTGCCGAACTGGCTGCTG                                                                                                          <  3:298454/149‑1                                                 GCGACTTCGGCGGTAGCACGCTCGGCCTGCTGGTTGGCCTGGGCTTCTGCGTCGGAGCTGATGTTGCTGCTGGCGACAGCAGCCGTCACGGCAAGGCCAGCAGCCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTG                                                                                                          <  6:399219/149‑1                                                                                                                                                    GCAGCCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGGCATCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAAGTCGCT        <  2:376347/148‑1                                                                                                                                                      AGCCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGCCAGCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAAGTCGCTGCC     <  4:272064/149‑1                                                                                                                                                      AGCCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGCCAGCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAAGTCGCTGCC     <  4:272070/149‑1                                                                                                                                                        CCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGCCAGCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAAGTCGCTGCCGT   >  1:241661/1‑149                                                                                                                                                        CCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGCCAGCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAAGTCG          >  3:120046/1‑142                                                                                                                                                        CCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGCCAGCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAAGTCG          <  4:120046/142‑1                                                                                                                                                        CCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGCCAGCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAA              >  2:35815/1‑138                                                                                                                                                        CCACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGCCAGCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAA              <  1:35815/138‑1                                                                                                                                                         CACAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGCCAGCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAAGTCGCTGCCGTT  <  2:241661/149‑1                                                                                                                                                                                                                                                                                                               TGCTCGACCGGTTGGGCGGCTTCGCTGTTGTCGGTTTCTGCAACGGCAGCGACTTCGGCGGTAGCACGCTCGGCCTGCTGGTTGGCCTGGGCTTCTGCGTCGGAGCTGATGTTGCTGCTGGCGACAGCAGCCGTCACGGCAAGGCCAGCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2147764‑2147917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagccaCAACAGCACCAGGCCACCGAGCTGGGTGCCGAACTGGCTGCTGGCCTTGCCGTGACGGCTGCTGTCGCCAGCAGCAACATCAGCTCCGACGCAGAAGCCCAGGCCAACCAGCAGGCCGAGCGTGCTACCGCCGAAGTCGCTGCCGTT  <  NC_002947/2147951‑2147805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.