New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2361932 | 62 (0.870) | 5 (0.070) | 5/250 | NT | 9.2% | coding (1945/2724 nt) | PP_2076 | hypothetical protein |
? | NC_002947 | 3838247 = | 41 (0.610) | coding (1842/2673 nt) | PP_3388 | hypothetical protein |
TCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAAACACGCACTTTGTAGAAGTCACTGTTCCGGGCCTGCATCAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2361782‑2361932 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaacccACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGCAGGCCCGGAACAGTGACTTCTACAAAGTGCGTGTTTCTGGGCTGGTGTGCCTGCTGGAGGGGATGCTGATGGCCTTCAAAGCGCGC > NC_002947/3838247‑3838394 TCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAAACACGCACTTTGTAGAAGTCACTGTTCCGGGCCTGCATCAAC > 6:37633/1‑149 ATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAACAACGCACTTTGTAGAAGTCAATGTTACGGGCCTGCATCAACC > 8:362078/1‑148 ATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAAACACGCACTTTGTAGAAGTCACTGTTCCGGGCCTGCATCAACCC > 2:20618/1‑149 ATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAAACACGCACTTTGTAGAAGTCACTGTTCCGGGCCTGCATCAACCC > 8:366426/1‑149 GCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAAACACGCACTTTGTAGAAGTCACTGTTCCGGGCCTGCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAG > 2:310317/1‑149 AAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAAACACGCACTTTGTAGAAGTCACTGTTCCGGGCCTGCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGCA < 2:141405/149‑1 AAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAAACACGCACTTTGTAGAAGTCACTGTTCCGGGCCTGCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGC < 6:60350/148‑1 CATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAAACACGCACTTTGTAGAAGTCACTGTTCCGGGCCTGCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGCAGGCCC < 6:145365/149‑1 TCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAAACACGCACTTTGTAGAAGTCACTGTTCCGGGCCTGCATCAACCCACAACGCAGCGCAGGCCAGGTATCCAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGCAGGCCCGG < 1:310317/149‑1 CATCAACCCACAACGCAGCGCAGGCGAGGTATCAAGGTACCTCGTCCAGGCTTGGGCTGAAGGGTTGATGCAGGCCCGGAACAGTGACTTCTACAAAGTGCGTGTTTCTGGGCTGGTGTGCCTGCTGGAGGGGATGCTGATGGCCTTCA < 2:125381/149‑1 ATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGCAGGCCCGGAACAGTGACTTCTACAAAGTGCGTGTTTCTGGGCTGGTGTGCCTGCTGGAGGGGATGCTGATGGCCTTCA > 5:352796/1‑148 CCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGCAGGCCCGGAACAGTGACTTCTACAAAGTGCGTGTTTCTGGGCTGGTGTGCCTGCTGGAGGGGATGCTGATGGCCTTCAAAGAGCG > 8:259873/1‑149 CACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGCAGGCCCGGAACAGTGACTTCTACAAAGTGCGTGTTTCTGGGCTGGTGTGCCTGCTGGAGGGGATGCTGATGGCCTTCAAAGCGCGC > 8:128331/1‑149 TCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAAACACGCACTTTGTAGAAGTCACTGTTCCGGGCCTGCATCAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2361782‑2361932 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaacccACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGCAGGCCCGGAACAGTGACTTCTACAAAGTGCGTGTTTCTGGGCTGGTGTGCCTGCTGGAGGGGATGCTGATGGCCTTCAAAGCGCGC > NC_002947/3838247‑3838394 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |