| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2764789 = | 54 (0.750) | 3 (0.040) | 3/254 | NT | 5.9% | coding (213/1095 nt) | PP_2418 | cobalamin ABC transporter substrate‑binding protein |
| ? | NC_002947 | 2764826 = | 44 (0.650) | coding (176/1095 nt) | PP_2418 | cobalamin ABC transporter substrate‑binding protein | |||||
CGATAGGAGATCGCCCAGCATGCTGCTCCGTTTCGCCACCCTGCTCGC‑GGGCCTAAGCCTCACTGGCCTGGCCCAGGCCGCTGCCACCCACTACCCGCTGACGGTCGACAACTGCGGCAAGCCGCAGGTTTTTGCCCAGGCGCCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2764936‑2764789‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcagTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCCGCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCAT > NC_002947/2764826‑2764969 CGATAGGAGATCGCCCAGCATGCTGCTCCGTTTCGCCACCCTGCTCGCGGGGCCTAAGCCTCACTGGCCTGGCCCAGGCCGCTGCCACCCACTACCCGCTGACGGTCGACAACTGCGGCAAGCCGCAGGTTTTTGCCCAGGCGCCGCAG > 1:101837/1‑149 TCGACAACTGCGGCAAGCCGCAGGTTTTTGCCCAGGCGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCCGCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTC > 6:70190/1‑149 CTGCGGCAAGCCGCAGGTTTTTGCCCAGGCGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCCGCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGAT > 7:194071/1‑139 CTGCGGCAAGCCGCAGGTTTTTGCCCAGGCGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCAGCTAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGAT < 8:194071/139‑1 CGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCCGCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCAT > 1:261970/1‑149 CGATAGGAGATCGCCCAGCATGCTGCTCCGTTTCGCCACCCTGCTCGC‑GGGCCTAAGCCTCACTGGCCTGGCCCAGGCCGCTGCCACCCACTACCCGCTGACGGTCGACAACTGCGGCAAGCCGCAGGTTTTTGCCCAGGCGCCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2764936‑2764789‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcagTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCCGCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCAT > NC_002947/2764826‑2764969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |