New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2764789 = | 54 (0.750) | 3 (0.040) | 3/254 | NT | 5.9% | coding (213/1095 nt) | PP_2418 | cobalamin ABC transporter substrate‑binding protein |
? | NC_002947 | 2764826 = | 44 (0.650) | coding (176/1095 nt) | PP_2418 | cobalamin ABC transporter substrate‑binding protein |
TGGTATTCCGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCC > NC_002947/2764679‑2764973 | tGGTATTCCGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGtt > 5:215222/1‑149 (MQ=255) gTATTCCGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTg < 7:285290/148‑1 (MQ=255) gTATTCCGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGt > 2:101837/1‑149 (MQ=255) gTATTCCGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGt < 7:319441/149‑1 (MQ=255) tATTCCGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTc > 3:127539/1‑149 (MQ=255) ttCCGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGa > 4:250159/1‑149 (MQ=255) ttCCGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGa < 3:250159/149‑1 (MQ=255) gagatcgcccagcatgctgctccgtttcgccaccctgctcgcgggcctaagcctcactggcctggcccaggccgctgccacccactacccgctgacggtcgacaaCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGa > 6:70190‑M1/106‑149 (MQ=255) ccGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCACGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTCGGCAAAAACCTGCGGCTTGCCGCAGTTCTCGAcc > 4:43357/1‑149 (MQ=255) cGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCg > 8:267006/1‑149 (MQ=255) ggCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGt > 8:411100/1‑149 (MQ=255) aTACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGc < 5:426612/149‑1 (MQ=255) cGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCggg < 2:2281/149‑1 (MQ=255) cGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCggg > 7:27856/1‑149 (MQ=255) ttgttgAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCggg > 5:417689/1‑147 (MQ=255) ttgttgAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTa < 3:208761/149‑1 (MQ=255) gttgAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAgt < 1:156499/149‑1 (MQ=255) aCCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAgtgggtg < 1:208558/149‑1 (MQ=255) gAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGc < 2:67211/149‑1 (MQ=255) cccGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGggc > 5:289104/1‑149 (MQ=255) cccGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGggc > 3:74672/1‑149 (MQ=255) cAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGggccaggc < 6:215222/149‑1 (MQ=255) gTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGGGGCAGCGGCCTGGGCCAGGCCAGTg < 8:74776/148‑1 (MQ=255) cAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCt > 8:262061/1‑147 (MQ=255) aGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAg < 7:411100/149‑1 (MQ=255) aGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCc‑gc < 8:110077/149‑1 (MQ=255) agagCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAgg > 3:274576/1‑149 (MQ=255) gcagcTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTg < 4:274576/149‑1 (MQ=255) ggTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAAc > 5:282870/1‑149 (MQ=255) tACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACgg < 5:136957/149‑1 (MQ=255) ccGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGa < 1:210628/148‑1 (MQ=255) ggCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGagca < 3:311598/149‑1 (MQ=255) ggCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGagca < 6:282870/149‑1 (MQ=255) gCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGagcag > 7:166032/1‑149 (MQ=255) gCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCA‑TCGAGCAGGGTGGAGAAACGGagcag > 8:151723/1‑149 (MQ=255) ccGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCt > 5:17528/1‑149 (MQ=255) ccGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCt > 3:195089/1‑149 (MQ=255) aTGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTggg < 8:340481/149‑1 (MQ=255) gTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGa > 6:436020/1‑149 (MQ=255) tcgacaactgcggcaagccgcaggtttttgcccaggcgccgcagTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGAtctc > 6:70190‑M2/45‑149 (MQ=255) cGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGAtctc < 7:267006/149‑1 (MQ=255) cgcgcTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCg < 8:118664/141‑1 (MQ=255) cgcgcTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCg > 7:118664/1‑141 (MQ=255) gcTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCg < 6:193452/149‑1 (MQ=255) ctgcggcaagccgcaggtttttgcccaggcgccgcagTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGAt > 7:194071‑M2/38‑139 (MQ=255) ctgcggcaagccgcaggtttttgcccaggcgccgcagTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCA‑GCTAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGAt < 8:194071‑M2/102‑1 (MQ=255) CTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCCCGCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCg > 1:101837‑M1/1‑149 (MQ=255) ggCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGt < 2:342355/148‑1 (MQ=255) gCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGt > 5:284281/1‑147 (MQ=255) gCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGa < 4:127539/149‑1 (MQ=255) cAAAAACCTGCGGCTTGCCGCAGTTGGCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAg < 2:402677/149‑1 (MQ=255) aaaaaCCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAg > 3:386835/1‑148 (MQ=255) cTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTg < 6:44933/140‑1 (MQ=255) cTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTg > 5:44933/1‑140 (MQ=255) ttGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAg > 5:404917/1‑149 (MQ=255) cgcagTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCAt > 1:261970‑M2/6‑149 (MQ=255) ttGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGcc > 5:127862/1‑148 (MQ=255) | TGGTATTCCGGCAATACGTTGTTGAACCACAGCGAGGTGCCCGCCAGCTTGTCACCCAGCCCCAGGGCATAGAGCAGCTCGGTACCGGCCTGGCCGATGGTGACGGCGCGCTGCGGCGCCTGGGCAAAAACCTGCGGCTTGCCGCAGTTGTCGACCGTCAGCGGGTAGTGGGTGGCAGCGGCCTGGGCCAGGCCAGTGAGGCTTAGGCCC‑GCGAGCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCC > NC_002947/2764679‑2764973 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |