| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2995914 = | 38 (0.530) | 3 (0.040) | 3/256 | NT | 8.1% | coding (930/1017 nt) | PP_2620 | hypothetical protein |
| ? | NC_002947 | 2995963 = | 32 (0.470) | coding (881/1017 nt) | PP_2620 | hypothetical protein | |||||
GACCAGACGCAGCTGCGGGACTTGCTGCCCAGCGGCATCAACTTCGGCCGTTTGCGTGCACTGATCGACTTTCTGCTGCGTGACGGGCTGGCCTATGACCTGGAGCTGCGCCTCAAGCAGAGCGCGTTGTCACCCTTCTGCTTGCACCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2996066‑2995914‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcagcTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGCAAGTCCCGCAGCTGC > NC_002947/2995963‑2996058 GACCAGACGCAGCTGCGGGACTTGCTGCCCAGCGGCATCAACTTCGGCCGTTTGCGTGCACTGATCGACTTTCTGCTGCGTGACGGGCTGGCCTATGACCTGGAGCTGCGCCTCAAGCAGAGCGCGTTGTCACCCTTCTGCTTGCACCG > 5:243446/1‑149 CAGACGCAGCTGCGGGACTTGCTGCCCAGCGGCATCAACTTCGGCCGTTTGCGTGCACTGATCGACTTTCTGCTGCGTGACGGGCTGGCCTATGACCTGGAGCTGCGCCTCAAGCAGAGCGCGTTGTCACCCTTCTGCTTGCACCGCAG > 4:263990/1‑149 AGACGCAGCTGCGGGACTTGCTGCCCAGCGGCATCAACTTCGGCCGTTTGCGTGCACTGATCGACTTTCTGCTGCGTGACGGGCTGGCCTATGACCTGGAGCTGCGCCTCAAGCAGAGCGCGTTGTCACCCTTCTGCTTGCACCGCAGC > 5:306917/1‑149 ACCTGGAGCTGCGCCTCAAGCAGAGCGCGTTGTCACCCTTCTGCTTGCACCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGC > 5:27130/1‑137 ACCTGGAGCTGCGCCTCAAGCAGAGCGCGTTGTCACCCTTCTGCTTGCACCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGC < 6:27130/137‑1 TGGAGCTGCGCCTCAAGCAGAGCGCGTTGTCACCCTTCTGCTTGCACCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGCAAGTCCCGCAGCTGC > 6:162671/1‑149 CTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCTCTGGGCAGCAAGTCCC < 4:241520/89‑1 CTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGCAAGTCCC > 3:241520/1‑89 GACCAGACGCAGCTGCGGGACTTGCTGCCCAGCGGCATCAACTTCGGCCGTTTGCGTGCACTGATCGACTTTCTGCTGCGTGACGGGCTGGCCTATGACCTGGAGCTGCGCCTCAAGCAGAGCGCGTTGTCACCCTTCTGCTTGCACCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2996066‑2995914‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcagcTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGCAAGTCCCGCAGCTGC > NC_002947/2995963‑2996058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |