New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2995914 =	38 (0.530)	3 (0.040)	3/256	NT	8.1%	coding (930/1017 nt)	PP_2620	hypothetical protein
	?	NC_002947	2995963 =	32 (0.470)					coding (881/1017 nt)	PP_2620	hypothetical protein

TGCCGAGCAGTAACGCCGTGCTGCAGTTGGTCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGCAAGTCCCGCAGCTGCGTCT  >  NC_002947/2995766‑2996062                                                                                                                                                     |                                                                                                                                                     tGCCGAGCAGTAACGCCGTGCTGCAGTTGGTCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTgg                                                                                                                                                      >  7:360510/1‑149 (MQ=255)     gAGCAGTAACGCCGTGCTGCAGTTGGTCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGc                                                                                                                                                  <  4:12874/149‑1 (MQ=255)           tAACGCCGTGCTGCAGTTGGTCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCTGTGc                                                                                                                                             >  6:384717/1‑148 (MQ=255)           tAACGCCGTGCTGCAGTTGGTCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGc                                                                                                                                             >  6:243446/1‑148 (MQ=255)           tAACGCCGTGCTGCAGTTGGTCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCACTGGCTGCGGTGc                                                                                                                                             >  7:278244/1‑148 (MQ=255)             aCGCCGTGCTGCAGTTGGTCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCaa                                                                                                                                           <  7:311858/148‑1 (MQ=255)              cGCCGTGCTGCAGTTGGTCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAg                                                                                                                                          >  8:89413/1‑148 (MQ=255)                        cAGTTGGTCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGt                                                                                                                                 <  1:383201/147‑1 (MQ=255)                               tCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAAcgcg                                                                                                                        <  1:82112/149‑1 (MQ=255)                                           aTGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAgg                                                                                                            >  4:255567/1‑149 (MQ=255)                                             gCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGgcg                                                                                                          >  2:246515/1‑149 (MQ=255)                                               tCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGgcg                                                                                                          >  3:163227/1‑147 (MQ=255)                                                 aaGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAg                                                                                                       <  4:307573/148‑1 (MQ=255)                                                   ggTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTc                                                                                                    >  2:340474/1‑149 (MQ=255)                                                     gcagctgcgggacttgctgcccagcggcatcaacttcggccgtttgcgtgcactgatcgactttctgctgcgtgacgggctggcctatgacctggaGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCa                                                                                                  >  6:162671‑M1/97‑149 (MQ=255)                                                         tgtgTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGt                                                                                               >  2:223282/1‑148 (MQ=255)                                                          gtgtTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTTGCCATTCCGGTCCTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGAAGAAGGTTGACAACTCGCTCTGCTTGAGGCGCAGCTCCAGGTCa                                                                                             <  4:314287/149‑1 (MQ=25)                                                             gggacttgctgcccagcggcatcaacttcggccgtttgcgtgcactgatcgactttctgctgcgtgacgggctggcctatgacctggag                                                                                                                                                      >  3:241520‑M1/89‑89 (MQ=255)                                                             gggacttgctgcccagaggcatcaacttcggccgtttgcgtgcactgatcgactttctgctgcgtgacgggctggcctatgacctggag                                                                                                                                                      <  4:241520‑M1/1‑1 (MQ=255)                                                              tCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCGGCTCCAGGTCATAgg                                                                                         >  8:402215/1‑149 (MQ=255)                                                               cATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAgt                                                                                         <  8:360510/148‑2 (MQ=255)                                                                 tGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGc                                                                                        >  5:300896/1‑147 (MQ=255)                                                                    gctgcccagcggcatcaacttcggccgtttgcgtgcactgatcgactttctgctgcgtgacgggctggcctatgacctggaGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGt                                                                                               <  6:27130‑M1/56‑1 (MQ=255)                                                                    gctgcccagcggcatcaacttcggccgtttgcgtgcactgatcgactttctgctgcgtgacgggctggcctatgacctggaGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGt                                                                                               >  5:27130‑M1/82‑137 (MQ=255)                                                                       cccccGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGt                                                                                <  7:89413/149‑1 (MQ=255)                                                                                      aaCCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGt                                                                 >  3:79472/1‑149 (MQ=255)                                                                                      aaCCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCACAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGt                                                                 >  4:427023/1‑149 (MQ=255)                                                                                          gggCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAg                                                                                                       <  1:198370/107‑1 (MQ=255)                                                                                          gggCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAg                                                                                                       >  2:198370/1‑107 (MQ=255)                                                                                          gggCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGAt                                                             <  1:340474/149‑1 (MQ=255)                                                                                           ggCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATc                                                            <  3:255567/149‑1 (MQ=255)                                                                                            gCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCa                                                           <  1:246515/149‑1 (MQ=255)                                                                                                 tCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCa                                                      >  6:306917/1‑149 (MQ=255)                                                                                                     gCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCATCACGCAGCAGAAAGTCGATCAGTGCACg                                                    <  8:1515/147‑1 (MQ=255)                                                                                                        aTGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAAc                                               >  7:192782/1‑149 (MQ=255)                                                                                                        aTGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAAc                                               >  3:174924/1‑149 (MQ=255)                                                                                                         tGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACg                                              >  3:296298/1‑149 (MQ=255)                                                                                                         tGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACg                                              >  8:183087/1‑149 (MQ=255)                                                                                                                  tcgACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGAAAACGCTCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGtt                                     <  7:402215/149‑1 (MQ=255)                                                                                                                    gacgaAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGa                                   >  1:57210/1‑149 (MQ=255)                                                                                                                          gCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGc                             >  5:35969/1‑149 (MQ=255)                                                                                                                             ggTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTgg                          >  3:263990/1‑149 (MQ=255)                                                                                                                                  aGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGgcagc                     <  6:35969/149‑1 (MQ=255)                                                                                                                                            tGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCACAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGCAAGTCCCGCa           <  3:427023/149‑1 (MQ=255)                                                                                                                                               gcCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGCAAGTCCCGCAGCt        >  8:342835/1‑149 (MQ=255)                                                                                                                                                     GCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGCAAGTCCCGCAGCTGCGTCt  >  5:306917‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TGCCGAGCAGTAACGCCGTGCTGCAGTTGGTCGAGGTTGGTGATGCTCAAGGTGACTGTGTTCATGAGCGCCCCCGGATGCGTACAACCGGGCTGATCTGGCCATGCCGGTCGTCGACGAAGCTGGTCCAGCCCAGGTATGCGCCCTGGCTGCGGTGCAAGCAGAAGGGTGACAACGCGCTCTGCTTGAGGCGCAGCTCCAGGTCATAGGCCAGCCCGTCACGCAGCAGAAAGTCGATCAGTGCACGCAAACGGCCGAAGTTGATGCCGCTGGGCAGCAAGTCCCGCAGCTGCGTCT  >  NC_002947/2995766‑2996062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.