| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3005248 = | 50 (0.700) | 5 (0.070) | 5/258 | NT | 9.2% | coding (1829/3621 nt) | PP_2627 | membrane protein |
| ? | NC_002947 | 3005329 = | 50 (0.730) | coding (1910/3621 nt) | PP_2627 | membrane protein | |||||
GCTGGCGGTACTGCGGCAAATCGGTATCGGCATAGGCCAAGGCGTATTTCAGGTGCTGCATGAGGTCACGCTGCAACTGCCCCTGGCCAGGAAAGGCCCGTTGCCACTGACGGGCCATCCAGTCCTCGACCCATTCGGGCCGGCGGCTGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3005400‑3005248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgcAGCGTGACCTCATGCAGCACCTGAAATACGCCTTGGCCTATGCCGATACCGATTTGCCGCAGTACCGCCAGCGGGTCAGCGAAGTGCAGCAGGCGCTGCGCAAATTGCCGTTGCCACAGCGGGTCTATGCAGGGCTGAAACAA > NC_002947/3005329‑3005471 GCTGGCGGTACTGCGGCAAATCGGTATCGGCATAGGCCAAGGCGTATTTCAGGTGCTGCATGAGGTCACGCTGCAACTGCCCCTGGCCAGGAAAGGCCCGTTGCCACTGACGGGCCATCCAGTCCTCGACCCATTCGGGCCGGCGGCTG > 7:209180/1‑149 CTGCAACTGCCCCTGGCCAGGAAAGGCCCGTTGCCACTGACGGGCCATCCAGTCCTCGACCCATTCGGGCCGGCGGCTGTTGCAGCGTGACCTCATGCAGCACCTGAAATACGCCTTGGCCTATGCCGATACCGATTTGCCGCAGTACC > 5:130016/1‑149 TGCAACTGCCCCTGGCCAGGAAAGGCCCGTTGCCACTGACGGGCCATCCAGTCCTCGCCCCATTCGGGCCGGCGGCTGTTGCAGCGTGCCCTCCTGCAGCACCTGAAATACGCCTTGGCCTATGCCGATACCGATTTGCCCCAGTACCG > 5:12531/1‑149 GCAACTGCCCCTGGCCAGGAAAGGCCCGTTGCCACTGACGGGCCATCCAGTCCTCGACCCATTCGGGCCGGCGGCTGTTGCAGCGTGACCTCATGCAGCACCTGAAATACGCCTTGGCCTATGCCGATACCGATTTGCCGCAGTACCGC > 4:52858/1‑149 ATCCAGTCCTCGACCCATTCGGGCCGGCGGCTGTTGCAGCGTGACCTCATGCAGCACCTGAAATACGCCTTGGCCTATGCCGATACCGATTTGCCGCAGTACCGCCAGCGGGTCAGCGAAGTGCAGCAGGCGCTGCGCAAATTGCCGTT < 6:130016/149‑1 GGCCGGCGGCTGTTGCAGCGTGACCTCATGCAGCACCTGAAATACGCCTTGGCCTATGCCGATACCGATTTGCCGCAGTACCGCCAGCGGGTCAGCGAAGTGCAGCAGGCGCTGCGCAAATTGCCGTTGCCACAGCGGGTCTATGCAGG < 3:52858/149‑1 GTTGCAGCGTGACCTCATGCAGCACCTGAAATACGCCTTGGCCTATGCCGATACCGATTTGCCGCAGTACCGCCAGCGGGTCAGCGAAGTGCAGCAGGCGCTGCGCAAATTGCCGTTGCCACAGCGGGTCTATGCAGGGCTGAAACAA > 5:211785/1‑148 CAGCGTGACCTCATGCAGCACCTGAAATACGCCTTGGCCTATGCCGATACCGATTTGCCGCAGTACCGCCAGCGGGTCAGCGAAGTGCAGCAGGCGCTGCGCAAATTGCCGTTGCCACAGCGGGTCTATG < 7:206427/130‑1 CAGCGTGACCTCATGCAGCACCTGAAATACGCCTTGGCCTATGCCGATACCGATTTGCCGCAGTACCGCCAGCGGGTCAGCGAAGTGCAGCAGGCGCTGCGCAAATTGCCGTTGCCACAGCGGGTCTATG > 8:206427/1‑130 GCTGGCGGTACTGCGGCAAATCGGTATCGGCATAGGCCAAGGCGTATTTCAGGTGCTGCATGAGGTCACGCTGCAACTGCCCCTGGCCAGGAAAGGCCCGTTGCCACTGACGGGCCATCCAGTCCTCGACCCATTCGGGCCGGCGGCTGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3005400‑3005248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgcAGCGTGACCTCATGCAGCACCTGAAATACGCCTTGGCCTATGCCGATACCGATTTGCCGCAGTACCGCCAGCGGGTCAGCGAAGTGCAGCAGGCGCTGCGCAAATTGCCGTTGCCACAGCGGGTCTATGCAGGGCTGAAACAA > NC_002947/3005329‑3005471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |