New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3190461 =38 (0.530)3 (0.040) 3/256 NT 7.0% coding (189/1380 nt) PP_2799 class III aminotransferase
?NC_002947 3190500 = 43 (0.630)coding (150/1380 nt) PP_2799 class III aminotransferase

GCGGCACTCATTCATCCCAACACCAACCTGGCCCAGCACCGAGAGGTCGGGCCACTCGTGATCGCCAGAGGTGACGGCGTCCGGGTCTTTGACGAGCAAGGCAATGCCTACATCGAAGCCATGTCGGGCCTGTGGAGCGCGGCATTGGGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3190613‑3190461
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcttcGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGATGAATGAGTGCCGCCAGATCGTTCTGAACGGTTGAAGAGTGGGTGC  >  NC_002947/3190500‑3190645
                                                                                                                                                                                                                                                                                                           
GCGGCACTCATTCATCCCACCACCAACCTGGCCCAGCACCGAGAGGTCGGGCCACTCGTGATCGCCAGAGGTGACGGCGTCCGGGTCTTTGACGAGCAAGGCAATGCCTACATCGAAGCCATGTCGGGCCTGTGGAGCGCGGCATTGGG                                                                                                                                                        <  7:148580/149‑1
                CCAACACCAACCTGGCCCAGCACCGAGAGGTCGGGCCACTCGTGATCGCCAGAGGTGACGGCGTCCGGGTCTTTGACGAGCAAGGCAATGCCTACATCGAAGCCATGTCGGGCCTGTGGAGCGCGGCATTGGG                                                                                                                                                        <  5:124080/133‑1
                CCAACACCAACCTGGCCCAGCACCGAGAGGTCGGGCCACTCGTGATCGCCAGAGGTGACGGCGTCCGGGTCTTTGACGAGCAAGGCAATGCCTACATCGAAGCCATGTCGGGCCTGTGGAGCGCGGCATTGGG                                                                                                                                                        >  6:124080/1‑133
                                                                                                            TACATCGAAGCCATGTCGGGCCTGTGGAGCGCGGCATTGGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGATGAA                                            >  3:331116/1‑149
                                                                                                             ACATCGAAGCCATGTCGGGCCTGTGGAGCGCGGCATTGGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGG                                                  >  3:257823/1‑142
                                                                                                             ACATCGAAGCCATGTCGGGCCTGTGGAGCGCGGCATTGGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGG                                                  <  4:257823/142‑1
                                                                                                                                                     CTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGATGAATGAGTGCCGCCAGATCGTTCTGAACGGTTGAAGAGTGGGTG   <  4:422404/149‑1
                                                                                                                                                      TTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGATGAATGAGTGCCGCCAGATCGTTCTGAACGGTTGAAGAGTGGGTGC  >  4:147831/1‑149
                                                                                                                                                                                                                                                                                                           
GCGGCACTCATTCATCCCAACACCAACCTGGCCCAGCACCGAGAGGTCGGGCCACTCGTGATCGCCAGAGGTGACGGCGTCCGGGTCTTTGACGAGCAAGGCAATGCCTACATCGAAGCCATGTCGGGCCTGTGGAGCGCGGCATTGGGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3190613‑3190461
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcttcGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGATGAATGAGTGCCGCCAGATCGTTCTGAACGGTTGAAGAGTGGGTGC  >  NC_002947/3190500‑3190645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.