New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3216667 | 53 (0.740) | 3 (0.040) | 3/254 | NT | 5.5% | coding (2582/3129 nt) | mexD | multidrug RND transporter MexD |
? | NC_002947 | = 3216711 | 52 (0.770) | coding (2626/3129 nt) | mexD | multidrug RND transporter MexD |
AACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3216514‑3216667 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaggaTGGCCAGGGCGAACAGGCTGGCAGCCTGGCCGCTGGAGACCTTCTCCTGGTAGGAAAGGCCCGTCCAGGCGTAGCCGATACCTGGCGGCAGCTCGCTGACCAGGCGCTCCATCTCGGCCATTGCCTGCCCGGTACTGTGCCCCGGCGA < NC_002947/3216711‑3216564 AACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTAC < 2:84818/149‑1 AACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTAC > 7:9127/1‑149 GCCTCGCCGGGGCACAGTACTGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGATGGCCAGGGCGAACAGGCTGGCAGCCTGGCCGCTGGAGACCT > 3:82709/1‑149 GCACAGTACCTGGCAGTCAATGGCCGAGATGGCGCGCCTGTTCAGCGAGCTGCCGACAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGTATGGCCAGGGCGAACAGGCTGGCAGCCTGGCCGCTGGAGACCTTCTCCTGGTAG < 6:287496/149‑1 AGTACTGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCGTTCCTACCAGGATGGCCAGGGCGAACAGGCTGGCAGCCTGGCCGCTGGAGACCTTCTCCTGGTAGGAAA < 4:82709/149‑1 ATGGCCAGGGCGAACAGGCTGGCAGCCTGGCCGCTGGAGACCTTCTCCTGGTAGGAAAGGCCCGTCCAGGCGTAGCCGATACCTGGCGGCAGCTCGCTGACCAGGCGCTCCATCTCGGCCATTGCCTGCCCGGTACTGTGCCCCGGCGA < 6:402804/149‑1 AACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3216514‑3216667 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaggaTGGCCAGGGCGAACAGGCTGGCAGCCTGGCCGCTGGAGACCTTCTCCTGGTAGGAAAGGCCCGTCCAGGCGTAGCCGATACCTGGCGGCAGCTCGCTGACCAGGCGCTCCATCTCGGCCATTGCCTGCCCGGTACTGTGCCCCGGCGA < NC_002947/3216711‑3216564 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |