New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3216667	53 (0.740)	3 (0.040)	3/254	NT	5.5%	coding (2582/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	= 3216711	52 (0.770)					coding (2626/3129 nt)	mexD	multidrug RND transporter MexD

TACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGCCCTGGGCGCGGTGTGGGC  >  NC_002947/3216525‑3216814                                                                                                                                               |                                                                                                                                                     tACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGt                                                                                                                                                >  3:183024/1‑149 (MQ=255)    aaCGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGtctc                                                                                                                                             >  1:57307/1‑149 (MQ=255)      cGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGACAAGGtctc                                                                                                                                             >  1:324476/1‑147 (MQ=255)        gTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGc                                                                                                                                         >  1:237185/1‑149 (MQ=255)             ccGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGc                                                                                                                                      >  4:124621/1‑147 (MQ=255)             ccGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGc                                                                                                                                      >  1:386715/1‑147 (MQ=255)                   aTCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGc                                                                                                                              <  2:57307/149‑1 (MQ=255)                       gCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGc                                                                                                                          <  3:81929/149‑1 (MQ=255)                            gCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGt                                                                                                                      <  8:243313/148‑1 (MQ=255)                                   aCGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑g                                                                                                             <  1:102063/149‑1 (MQ=255)                                     gCCTCGCCGGGGCACAGTACTGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAtggccagggcgaacaggctggcagcctggccgctggagacct                                                                                                            >  3:82709‑M1/1‑107 (MQ=255)                                     gCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGc                                                                                                           >  2:157124/1‑149 (MQ=255)                                        tCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCAt                                                                                                        <  6:402804‑M2/149‑2 (MQ=255)                                                gCACAGTACCTGGCAGTCAATGGCCGAGATGGCGCGCCTGTTCAGCGAGCTGCCGACAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGTAtggccagggcgaacaggctggcagcctggccgctggagaccttctcctggtag                                                                                                 <  6:287496‑M1/149‑54 (MQ=255)                                                gCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCtggtgg                                                                                                <  7:48685/149‑1 (MQ=255)                                                    aGTACTGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCGTTCCTACCAGGAtggccagggcgaacaggctggcagcctggccgctggagaccttctcctggtaggaaa                                                                                             <  4:82709‑M1/149‑58 (MQ=255)                                                      tACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTcc                                                                                          >  3:55606/1‑149 (MQ=255)                                                        ccGGGCAGGCAATGGCAGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGTCCTTTCCTACCAGGAGAAGGTCTCCATCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCctg                                                                                        <  6:220407/149‑1 (MQ=255)                                                          gggCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCctgct                                                                                      >  5:93376/1‑149 (MQ=255)                                                          gggCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCctg                                                                                        >  7:219548/1‑147 (MQ=255)                                                          gggCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCctg                                                                                        <  8:219548/147‑1 (MQ=255)                                                           ggcaggcaATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCctgctg                                                                                     >  2:366113/1‑149 (MQ=255)                                                                  aaTGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCa                                                                                                                                    <  2:243977/96‑1 (MQ=255)                                                                  aaTGGCCGAGATGGAGCGCCTGGTCAGCCAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCa                                                                                                                                    >  1:243977/1‑96 (MQ=255)                                                                      gCCGAGATGGCGCGCCTGGTCAGCGAGCTGCCGGCAGGTATCGGCTACGCCTTGACGGGGCTTTCCTACCAGGAGTAGGTCGCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCTAGGCCATCCTGGTGGTGTTCCTGCTGCTGGTGgcg                                                                            <  1:59810/148‑1 (MQ=255)                                                                        cGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTg                                                                         >  8:269480/1‑148 (MQ=255)                                                                        cGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTg                                                                         >  4:68336/1‑148 (MQ=255)                                                                             tGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGaa                                                                   <  2:386715/149‑1 (MQ=255)                                                                              ggAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGaa                                                                   <  8:9127/148‑1 (MQ=255)                                                                               gAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGGCTGGACGGTCCTTTCCTACCAGGAGAATGTCTGCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGaaa                                                                  <  7:156886/148‑1 (MQ=255)                                                                               gAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGaaa                                                                  <  3:124621/148‑1 (MQ=255)                                                                                   gcCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTgg                                                             <  1:373995/149‑1 (MQ=255)                                                                                    ccTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTggg                                                            <  3:221882/149‑1 (MQ=255)                                                                                    ccTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTgg                                                             <  1:157124/148‑1 (MQ=255)                                                                                       ggTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGgtgt                                                                                             >  8:246760/1‑113 (MQ=255)                                                                                       ggTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGgtgt                                                                                             <  7:246760/113‑1 (MQ=255)                                                                                        gTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGAt                                                        >  6:152215/1‑149 (MQ=255)                                                                                                    ccgccAGGTATCGGCTACGCCTGGACGGGGCTTTCCTTCCAGGATAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTGCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGt                                            <  2:324476/149‑1 (MQ=255)                                                                                                    ccgccAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACgg                                             <  2:237185/148‑1 (MQ=255)                                                                                                    ccgccAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGt                                            <  7:155014/149‑1 (MQ=255)                                                                                                    ccgccAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGt                                            >  3:294768/1‑149 (MQ=255)                                                                                                            tATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGt                                            <  6:132479/141‑1 (MQ=255)                                                                                                            tATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGt                                            >  5:132479/1‑141 (MQ=255)                                                                                                            tATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGa                                    <  5:402804/149‑1 (MQ=255)                                                                                                              tCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGAt                                   <  6:335591/148‑1 (MQ=255)                                                                                                              tCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATc                                  <  6:93376/149‑1 (MQ=255)                                                                                                                  cTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTAc                              <  4:49240/149‑1 (MQ=255)                                                                                                                  cTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTAc                              <  6:296237/149‑1 (MQ=255)                                                                                                                        cTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCg                        >  6:126453/1‑149 (MQ=255)                                                                                                                             cGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGcc                   <  7:269480/149‑1 (MQ=255)                                                                                                                              gggCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGccc                  >  2:102355/1‑149 (MQ=255)                                                                                                                                gCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGCCCTg                >  5:318647/1‑149 (MQ=255)                                                                                                                                 ccTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGCCCTgg               >  2:2247/1‑149 (MQ=255)                                                                                                                                   tttCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCAtcctggtaggaacggcccgtccaggcgtagccgatacctggcggcagctcgctgaccaggcgctccatctcggccattgcctgcccagtact             <  4:82709‑M2/149‑93 (MQ=255)                                                                                                                                     tCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGCCCTGGgc             <  5:126453/147‑1 (MQ=255)                                                                                                                                       cTACGAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGCCCTGGGcgcg          <  1:366113/148‑1 (MQ=255)                                                                                                                                       cTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCAtactggtaggaaaggcccgtccaggcgtagccgatacctgtcggcagctcgctgaacaggcgcgccatctcggccattgactgccaggtactgtgc         <  6:287496‑M2/149‑97 (MQ=255)                                                                                                                                         aCCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGCCCTGGGCGCGgtg       >  3:370565/1‑149 (MQ=255)                                                                                                                                          ccAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGCCCTGGGCGCGgtgt      >  5:56534/1‑149 (MQ=255)                                                                                                                                              gagaCGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGCCCTGGGCGCGGTGTGGGc  <  4:55606/149‑1 (MQ=255)                                                                                                                                              gagaAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGGTCGTACCGATCGGTGCCCTGGGCGCGGTGTGGGc  <  5:152215/149‑1 (MQ=255)                                                                                                                                               atggccagggcgaacaggctggcagcctggccgctggagaccttctcctggtaggaaaggcccgtccaggcgtagccgatacctggcggcagctcgctgaccaggcgctccatctcggccattgcctgcccggtactgtgccccggcga  <  6:402804‑M1/149‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                     TACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCAGCGGCCAGGCTGCCAGCCTGTTCGCCCT‑GGCCATCCTGGTGGTGTTCCTGCTGCTGGTGGCGCTGTACGAAAGCTGGGCGATCCCGCTGACGGTGATGCTGATCGTACCGATCGGTGCCCTGGGCGCGGTGTGGGC  >  NC_002947/3216525‑3216814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.