| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3243072 = | 52 (0.730) | 3 (0.040) | 3/254 | NT | 6.1% | coding (1149/2289 nt) | PP_2839 | hypothetical protein |
| ? | NC_002947 | 3243119 = | 43 (0.630) | coding (1196/2289 nt) | PP_2839 | hypothetical protein | |||||
GTACGGCGCACGCTGCTCTTTATACAGCGCGTTCCACTGCCTGTTCAGGCGGTCCAGCGCACTGACCAGCCCAGGCGGTTTGCTCTGGCGCAACGCCAGCAGCTGGCCCTGGTCAAGGCTGGCGCTGTACATGCCGCGCCCCCGCTCGACCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3243225‑3243072‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccaggGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTGCCCGAAGGCCTGCTGCGCGCCC > NC_002947/3243119‑3243265 GTACGGCGCACGCTGCTCTTTATACAGCGCGTTCCACTGCCTGTTCAGGCGGTCCAGCGCACTGACCAGCCCAGGCGGTTTGCTCTGGCGCAACGCCAGCAGCTGGCCCTGGTCAAGGCTGGCGCTGTACATGCCGCGCCCCCGCTCGA > 2:405127/1‑149 TACGGCGCACGCTGCTCTTTATACAGCGCGTTCCACTGCCTGTTCAGGCGGTCCAGCGCACTGACCAGCCCAGGCGGTTTGCTCTGGCGCAACGCCAGCAGCTGGCCCTGGTCAAGGCTGGCGCTGTACATGCCGCGCCCCCGCTCGAC > 2:351878/1‑149 GGCGCACGCTGCTCTTTATACAGCGCGTTCCACTGCCTGTTCAGGCGGTCCAGCGCACTGACCAGCCCAGGCGGTTTGCTCTGGCGCAACGCCAGCAGCTGGCCCTGGTCAAGGCTGGCGCTGTACATGCCGCGCCCCCGCTCGACCAG < 1:224628/149‑1 GCGCACGCTGCTCTTTATACAGCGCGTTCCACTGCCTGTTCAGGCGGTCCAGCGCACTGACCAGCCCAGGCGGTTTGCTCTGGCGCAACGCCAGCAGCTGGCCCTGGTCAAGGCTGGCGCTGTACATGCCGCGCCCCCGCTCGACCAGG < 2:404666/149‑1 CCCTGGTCAAGGCTGGCGCTGTACATGCCGCGCCCCCGCTCGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACTGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCG > 6:367651/1‑149 CCTGGTCAAGGCTGGCGCTGTACATGCCGCGCCCCCGCTCGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCCGTATAAAGAGCAGCGTG > 5:199086/1‑146 CCTGGTCAAGGCTGGCGCTGTACATGCCGCGCCCCCGCTCGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCCGTATAAAGAGCAGCGTG < 6:199086/146‑1 acgAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTGCCCGAAGGCCTGCTGCGC < 3:134141/146‑1 GGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTGCCCGAAGGCCTGCTGCGCGCCC < 2:224628/149‑1 GTACGGCGCACGCTGCTCTTTATACAGCGCGTTCCACTGCCTGTTCAGGCGGTCCAGCGCACTGACCAGCCCAGGCGGTTTGCTCTGGCGCAACGCCAGCAGCTGGCCCTGGTCAAGGCTGGCGCTGTACATGCCGCGCCCCCGCTCGACCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3243225‑3243072‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccaggGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTGCCCGAAGGCCTGCTGCGCGCCC > NC_002947/3243119‑3243265 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |