New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3243072 = | 52 (0.730) | 3 (0.040) | 3/254 | NT | 6.1% | coding (1149/2289 nt) | PP_2839 | hypothetical protein |
? | NC_002947 | 3243119 = | 43 (0.630) | coding (1196/2289 nt) | PP_2839 | hypothetical protein |
TCGCTGACTACAACTACTACTTCGATGCGCATGCTTTGCTGTTCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTGCCCGAAGGCCTGCTGCGCGCCC > NC_002947/3242972‑3243265 | tCGCTGACTACAACTACTACTTCGATGCGCATGCTTTGCTGTTCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGc > 4:377209/1‑149 (MQ=255) cgcacgctgctctttatacagcgcgttccactgccagttcaggcggtccagcgcactgaccagcccaggcggtttgctctggcgcaacgccagcagctggcCCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAggg > 6:367651‑M1/102‑149 (MQ=255) cGCTGACTACAACTACTACTTCGATGCGCATGCTTTGCTGTTCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGcc < 7:215627/149‑1 (MQ=255) gCTGACTACAACTACTACTTCGATGCGCATGCTTTGCTGTTCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGc > 5:134841/1‑147 (MQ=255) ctactTCGATGCGCATGCTTTGCTGTTCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTgc < 6:429497/149‑1 (MQ=255) cTTTGCTGTTCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCt < 2:279887/149‑1 (MQ=255) gCTGTTCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGc > 4:311375/1‑149 (MQ=255) tGTTCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTg > 1:176017/1‑149 (MQ=255) ttCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTg < 7:329773/147‑1 (MQ=255) ttCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTg < 5:282113/147‑1 (MQ=255) ttCGGCCTGACCCAGCTCAACCAGTCGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGTCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCGGGGCTg < 1:59613/147‑1 (MQ=255) tCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGt > 8:332009/1‑148 (MQ=255) ggCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCa < 6:134841/148‑1 (MQ=255) gCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTgg > 7:382388/1‑114 (MQ=255) gCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTgg < 8:382388/114‑1 (MQ=255) gCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGt > 4:83614/1‑149 (MQ=255) cTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTgc > 5:58410/1‑149 (MQ=255) aGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGAc < 7:332009/149‑1 (MQ=255) aaCCAGTGGCGAGTGGCAGTACTGGTGGGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGcc > 1:224841/1‑149 (MQ=255) aaCCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGcc < 6:401876/148‑1 (MQ=255) aCCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCt > 5:112361/1‑148 (MQ=255) aCCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTg < 3:311375/149‑1 (MQ=255) gCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAgg > 7:153099/1‑148 (MQ=255) gCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAgg > 4:316901/1‑148 (MQ=255) tACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAAcgcg > 3:87555/1‑149 (MQ=255) ggt‑ggACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTg > 3:401781/1‑148 (MQ=255) gt‑ggACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAg > 5:280620/1‑135 (MQ=255) gt‑ggACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAg < 6:280620/135‑1 (MQ=255) aCGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATaaa < 3:377209/149‑1 (MQ=255) cGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGtata > 8:71874/1‑146 (MQ=255) gAAGCGCATAACCTGGTCGTGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAaga < 1:322216/149‑1 (MQ=255) aGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAagag > 3:101147/1‑148 (MQ=255) aGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGagc < 7:71874/149‑1 (MQ=255) gcgcATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGagca < 4:401781/149‑1 (MQ=255) aTAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGt > 6:320774/1‑149 (MQ=255) aaCCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTgc > 8:165208/1‑149 (MQ=255) ccctggtcaaggctggcgctgtacatgccgcgcccccgctcgaccaggGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACTGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTgcg > 6:367651‑M2/49‑149 (MQ=255) aCCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTgc < 2:353479/148‑1 (MQ=255) cctggtcaaggctggcgctgtacatgccgcgcccccgctcgaccaggGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCCGTATAAAGAGCAGCGTg < 6:199086‑M2/99‑1 (MQ=255) cctggtcaaggctggcgctgtacatgccgcgcccccgctcgaccaggGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCCGTATAAAGAGCAGCGTg > 5:199086‑M2/48‑146 (MQ=255) CCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTgcgc < 2:404666‑M1/149‑1 (MQ=255) CTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGcc < 1:224628‑M1/149‑1 (MQ=255) GTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTa > 2:351878‑M1/1‑149 (MQ=255) TCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTAc > 2:405127‑M1/1‑149 (MQ=255) aGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAg < 6:58410/149‑1 (MQ=255) aGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAg < 5:320774/149‑1 (MQ=255) aGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAg < 4:87555/149‑1 (MQ=255) ggCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACTGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCGGTACCAGGCCAGc < 2:176017/149‑1 (MQ=255) gcgcGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGc > 7:122617/1‑148 (MQ=255) gcgGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAg > 3:33953/1‑149 (MQ=255) tGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTg < 3:83614/149‑1 (MQ=255) cgcCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAg > 2:156042/1‑136 (MQ=255) cgcCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTGCCCGAAg < 3:316901/149‑1 (MQ=255) ccAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTGCCCGAAGGc < 8:153099/149‑1 (MQ=255) ttGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCCCTGTATAAAGAGCAGCGTGCGCCGTACGCGGCCAGCGAGTCGCTGCCCGACGGCctgctg > 8:290786/1‑149 (MQ=255) acgaggGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTGCCCGAAGGCCTGCTgcgc < 3:134141‑M2/143‑1 (MQ=255) ggGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTGCCCGAAGGCCTGCTGCGCGccc < 2:224628‑M2/147‑1 (MQ=255) | TCGCTGACTACAACTACTACTTCGATGCGCATGCTTTGCTGTTCGGCCTGACCCAGCTCAACCAGTGGCGAGTGGCAGTACTGGT‑GGACGAAGCGCATAACCTGGTCGAGCGGGGGCGCGGCATGTACAGCGCCAGCCTTGACCAGGGCCAGCTGCTGGCGTTGCGCCAGAGCAAACCGCCTGGGCTGGTCAGTGCGCTGGACCGCCTGAACAGGCAGTGGAACGCGCTGTATAAAGAGCAGCGTGCGCCGTACCAGGCCAGCGAGTCGCTGCCCGAAGGCCTGCTGCGCGCCC > NC_002947/3242972‑3243265 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |