| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3328068 = | 55 (0.770) | 3 (0.040) | 3/254 | NT | 6.1% | coding (138/1329 nt) | udg | UDP‑glucose 6‑dehydrogenase |
| ? | NC_002947 | 3328107 = | 40 (0.590) | coding (99/1329 nt) | udg | UDP‑glucose 6‑dehydrogenase | |||||
TATCAAGGAGCTGTCAAATGAAGGTCACGGTTTTCGGAACCGGCTATGTCGGCCTGACCCAGGCAGTGTGCCTGGCCCAGGTAGGCCATTCGGTGTTGTGCATGGATGTCGATGCCGATCGGGTGGCCAGCCTGAGTGAAGGCCATTGCCCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3328222‑3328068‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgatcGGCATCGACATCCATGCACAACACCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAGCTGAAAAAAAATGTCACATC > NC_002947/3328107‑3328248 TATCAAGGAGCTGTCAAATGAAGGTCACGGTTTTCGGAACCGGCTATGTCGGCCTGACCCAGGCAGTGTGCCTGGCCCAGGTAGGCCATTCGGTGTTGTGCATGGATGTCGATGCCGATCGGGTGGCCAGCCTGAGTGAAGGCCATTGC > 4:337339/1‑149TATCAAGGAGCTGTCAAATGAAGGTCACGGTTTTCGGAACCGGATATGTCGGCCTGACCCAGGCAGTGTGCCTGGCCCAGGTAGGCCATTCGGTGTTGTGCATGGATGTCGATGCCGATCCGGTGGCCAGCCTGAGTGAAGGCCATTGC > 6:232265/1‑149 AAGGAGCTGTCAAATGAAGGTCACGGTTTTCGGAACCGGCTATGTCGGCCTGACCCAGGCAGTGTGCCTGGCCCAGGTAGGCCATTCGGTGTTGTGCATGGATGTCGATGCCGATCGGGTGGCCAGCCTGAGTGAAGGCCATTGCCCGA > 6:262241/1‑149 TGTCAAATGAAGGTCACGGTTTTCGGAACCGGCTATGTCGGCCTGACCCAGGCAGTGTGCCTGGCCCAGGTAGGCCATTCGGTGTTGTGCATGGATGTCGATGCCGATCGGGTGGCCAGCCTGAGTGAAGGCCATTGCCCGATCGtc > 4:285682/1‑145 ATGCTGATCGGGTGGCCAGCCTGAGTGAAGGCCATTGCCCGATCGGCATCGACATCCATGCACAACACCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGA > 1:219549/1‑147 TCGGGTGGCCAGCCTGAGTGAAGGCCATTGCCCGATCGGCATCGACATCCATGCTCAACACCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCAT > 1:332403/1‑136 TCGGGTGGCCAGCCTGAGTGAAGGCCATTGCCCGATCGGCATCGACATCCATGCACAACACCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCAT < 2:332403/136‑1 CCCGACCGGCATCGACATCCATGCACAACACCGACTGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAGCTGAAAAAAAATGTCACATC < 8:171561/149‑1 TATCAAGGAGCTGTCAAATGAAGGTCACGGTTTTCGGAACCGGCTATGTCGGCCTGACCCAGGCAGTGTGCCTGGCCCAGGTAGGCCATTCGGTGTTGTGCATGGATGTCGATGCCGATCGGGTGGCCAGCCTGAGTGAAGGCCATTGCCCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3328222‑3328068‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgatcGGCATCGACATCCATGCACAACACCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAGCTGAAAAAAAATGTCACATC > NC_002947/3328107‑3328248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |