New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3328068 =	55 (0.770)	3 (0.040)	3/254	NT	6.1%	coding (138/1329 nt)	udg	UDP‑glucose 6‑dehydrogenase
	?	NC_002947	3328107 =	40 (0.590)					coding (99/1329 nt)	udg	UDP‑glucose 6‑dehydrogenase

AATGAACTGCAACCGGGCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAGCTGAAAAAAAATGTCACATC  >  NC_002947/3327960‑3328248                                                                                                                                                    |                                                                                                                                               aaTGAACTGCAACCGGGCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCgg                                                                                                                                               >  7:121131/1‑149 (MQ=255)  aTGAACTGCAACCGGGCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGc                                                                                                                                              <  1:164332/149‑1 (MQ=255)    tgtcaaatgaaggtcacggttttcggaaccggctatgtcggcctgacccaggcagtgtgcctggcccaggtaggccattcggtgttgtgcatggatgtcgatgccgatcgggtggccagcctgagtgaaggccattgcccgatcgtc                                                                                                                                              >  4:285682‑M2/145‑145 (MQ=255)     aaCTGCAACCGGGCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATc                                                                                                                                           <  1:199857/149‑1 (MQ=255)      tcaaatgaaggtcacggttttcggaaccggctatgtcggcctgacccaggcagtgtgcctggcccaggtaggccattcggtgttgtgcatggatgtcgatgccGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCAGCAt                                                                                                                                            >  1:219549‑M1/104‑147 (MQ=255)      aCTGCAACCGGGCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATc                                                                                                                                           >  4:395479/1‑148 (MQ=255)       cTGCAACCGGGCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGa                                                                                                                                         <  2:133922/149‑1 (MQ=255)          cAACCGGGCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACa                                                                                                                                       <  8:121131/148‑1 (MQ=255)             ccGGGCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCa                                                                                                                                   >  2:46223/1‑149 (MQ=255)               gggCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATg                                                                                                                                 <  5:114486/149‑1 (MQ=255)               gggCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATg                                                                                                                                 <  3:395479/149‑1 (MQ=255)               gggCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATg                                                                                                                                 >  2:321291/1‑149 (MQ=255)                      gTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCacaaca                                                                                                                          <  1:255633/149‑1 (MQ=255)                         ggCAGCCGCTGCGGCATCCGTGGTGAAGCACAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑cc                                                                                                                       >  8:90666/1‑148 (MQ=255)                              ccGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATgg                                                                                                                 <  7:265029/149‑1 (MQ=255)                                    cGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTAc                                                                                                            <  2:239561/148‑1 (MQ=255)                                       cATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCAgg                                                                                                        <  4:37896/149‑1 (MQ=255)                                         tCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAACGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGTGc                                                                                                      >  2:221753/1‑149 (MQ=255)                                                 gAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGcaca                                                                                              >  5:429578/1‑149 (MQ=255)                                                 gAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCCCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGcaca                                                                                              >  6:39531/1‑149 (MQ=255)                                                   aGCGCAGCCGACCGCAGGCGAGGTTCTTCTCAAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCacac                                                                                             <  7:387186/148‑1 (MQ=255)                                                    gcgcAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTg                                                                                           >  1:123618/1‑149 (MQ=255)                                                      gcAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACACCCGAATGGCCTACCTGGGCCAGGCACACTGc                                                                                          <  1:46223/149‑1 (MQ=255)                                                        aGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTg                                                                                       >  6:145523/1‑149 (MQ=255)                                                         gCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTgg                                                                                      <  3:17755/149‑1 (MQ=255)                                                          ccGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATg                                                                                                                                 <  2:215542/106‑1 (MQ=255)                                                          ccGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATg                                                                                                                                 >  1:215542/1‑106 (MQ=255)                                                            gACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGt                                                                                    >  3:12209/1‑148 (MQ=255)                                                                 cAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCAGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGACCCAGGCAGTGTGCCTGGCCCAggta                                                                              <  8:174497/149‑3 (MQ=255)                                                                   ggCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGa                                                                            <  2:123618/149‑1 (MQ=255)                                                                          ttcttcTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGcc                                                                     <  5:145523/149‑1 (MQ=255)                                                                            cttctCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCgg                                                                   >  6:350984/1‑149 (MQ=255)                                                                                 ccAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTcc                                                               >  1:365889/1‑148 (MQ=255)                                                                                  cagcagCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCg                                                              >  5:262241/1‑148 (MQ=255)                                                                                          gcgcAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCTAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTg                                                     <  1:321291/149‑1 (MQ=255)                                                                                             cAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGAcc                                                  <  2:365889/149‑1 (MQ=255)                                                                                                    gggCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCAttt                                           <  7:90666/149‑1 (MQ=255)                                                                                                        atgctgatcgggtggccagcctgagtgaaggccattgcccgatcGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGa                                         >  1:219549‑M2/45‑147 (MQ=255)                                                                                                          gacGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACa                                       >  4:285682‑M1/4‑147 (MQ=255)                                                                                                          gAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCAGTTGACAGc                                     >  3:63278/1‑149 (MQ=255)                                                                                                          gAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGACAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGc                                     >  2:281785/1‑149 (MQ=255)                                                                                                            aGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTc                                   >  4:273479/1‑149 (MQ=255)                                                                                                               tcgggtggccagcctgagtgaaggccattgcccgatcGGCATCGACATCCATGCTCAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCAt                                             >  1:332403‑M2/38‑136 (MQ=255)                                                                                                               tcgggtggccagcctgagtgaaggccattgcccgatcGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCAt                                             <  2:332403‑M2/99‑1 (MQ=255)                                                                                                               TCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCtt                                >  6:262241‑M1/1‑149 (MQ=255)                                                                                                                   GCAATGGCCTTCACTCAGGCTGGCCACCGGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATATCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATa                            >  6:232265‑M1/1‑149 (MQ=255)                                                                                                                   GCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATa                            >  4:337339‑M1/1‑149 (MQ=255)                                                                                                                         gCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGaaa                       <  5:350984/148‑1 (MQ=255)                                                                                                                         gCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAg                      <  1:77051/149‑1 (MQ=255)                                                                                                                             tCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAGCTg                   >  2:149164/1‑148 (MQ=255)                                                                                                                                cTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAGCTGaaa                >  7:111031/1‑148 (MQ=255)                                                                                                                                          ccACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAGCTGAAAAAAAATGTca      >  5:305664/1‑148 (MQ=255)                                                                                                                                            aCCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAGCTGAAAAAAAATGTCACAt   >  5:238621/1‑149 (MQ=255)                                                                                                                                             cccgaccGGCATCGACATCCATGCACAACA‑CCGACTGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAGCTGAAAAAAAATGTCACATc  <  8:171561‑M2/142‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                               AATGAACTGCAACCGGGCATAGTTGGCAGCCGCTGCGGCATCCGTGGTGAAGCGCAGCCGACCGCAGGCGAGGTTCTTCTCCAGCAGCGGCGCAAGGCCGGGCTCGAAGATCGGGCAATGGCCTTCACTCAGGCTGGCCACCCGATCGGCATCGACATCCATGCACAACA‑CCGAATGGCCTACCTGGGCCAGGCACACTGCCTGGGTCAGGCCGACATAGCCGGTTCCGAAAACCGTGACCTTCATTTGACAGCTCCTTGATAGGAAAGCTGAAAAAAAATGTCACATC  >  NC_002947/3327960‑3328248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.