New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3390166	51 (0.710)	4 (0.060)	4/254	NT	8.0%	coding (326/804 nt)	PP_2992	hypothetical protein
	?	NC_002947	= 3390187	44 (0.650)					coding (305/804 nt)	PP_2992	hypothetical protein

GTTGTAGATGGTTTCGGCGACACGTCGCAGGTCGGGATTATTGGGGAAGTCCCACATCACGCCATGGCCCCCGGTGAAGTAGATGACGCCGAACTGGGACGGATCGATATCTGCGATCGGCAGCGTGTTCTGCAAGCGGGCGCGAAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3390015‑3390166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggccgCGCGTGAGCATTTGCAGTCCCCGGCCTTTCGCGCCCGCTTGCAGAACACGCTGCCGATCGCAGATATCGATCCGTCCCAGTTCGGCGTCATCTACTTCACCGGGGGCCATGGCGTGATGTGGGACTTCCCCAATAATCCCGACCTGC  <  NC_002947/3390187‑3390041                                                                                                                                                                                                                                                                                                             GTTGTAGATGGTTTCGGCGACACGTCGCAGGTCGGGATTATTGGGGAAGTCCCACATCACGCCATGGCCCCCGGTGAAGTAGATGACGCCGAACTGGGACGGATCGATATCTGCGATCGGCAGCGTGTTCTGCAAGCGGGCGCGAAA                                                                                                                                                          <  4:373972/147‑1                   GACACGTCGCAGGTCGGGATTAGTGGGGAAGTCCCACCTCACGCCATGGCCCCCGGTGACGTAGATGACGCCGAACTGGGACGGATCGATATCTGCGATCGGCAGCGTGTTCTGCCCGCGGGCGCGACAGGCCGCGCGTGAGCATTTGC                                                                                                                                      >  8:295998/1‑149                                    GATTATGGGGGAAGTCCCCCATCCCGCCATGGCCCCCGGTGAAGTAGAGGACGCCGAACTGGGACGGATCGATATCTGCGATCGGCAGCGTGTTCTGCAAGCGGGCGCGAAAGGCCGCGCGTGAGCATTTGCAGTCCCCGGCCTTTCGC                                                                                                                     <  7:295998/149‑1                                                    CCACATCACGCCATGGCCCCCGGTGAAGTAGATGACGCCGAACTGGGACGGATCGATATCTGCGATCGGCAGCGTGTTCTGCAAGCGGGCGCGAAAGGCCGCGCGTGAGCATTTGCAGTCCCCGGCCTTTCG                                                                                                                      >  7:199723/1‑132                                                    CCACATCACGCCATGGCCCCCGGTGAAGTAGATGACGCCGAACTGGGACGGATCGATATCTGCGATCGGCAGCGTGTTCTGCAAGCGGGCGCGAAAGGCCGCGCGTGAGCATTTGCAGTCCCCGGCCTTTCG                                                                                                                      <  8:199723/132‑1                                                                                                                                                  AAGGCCGCGCGTGAGCATTTGCAGTCCCCGGCCTTTCGCGCCCGCTTGCAGAACACGCTGCCGATCGCAGATATCGATCCGTCCCAGTTCGGCGTCATCTACTTCACCGGGGGCCATGGCGTGATGTGGGACTTCCCCAATAATCCCGA       >  3:35771/1‑149                                                                                                                                                    GGCCGCGCGTGAGCATTTGCAGTCCCCGGCCTTTCGCGCCCGCTTGCAGAACACGCTGCCGATCGCAGATATCGATCCGTCCCAGTTCGGCGTCATCTACTTCACCGGGGGCCATGGCGTGATGTGGGACTTCCCCAATAATCCCGACC     >  5:77004/1‑149                                                                                                                                                       CGCGCGTGAGCATTTGCAGTCCCCGGCCTTTCGCGCCCGCTTGCAGAACACGCTGCCGATCGCAGATATCGATCCGTCCCAGTTCGGCGTCATCTACTTCACCGGGGGCCATGGCGTGATGTGGGACTTCCCCAATAATCCCGACCTGC  <  4:353360/149‑1                                                                                                                                                       CGCGCGTGAGCATTTGCAGTCCCCGGCCTTTCGCGCCCGCTTGCAGAACACGCTGCCGATCGCAGATATCGATCCGTCCCAGTTCGGCGTCATCTACTTCACCGGGGGCCATGGCGTGATGTGGGACTTCCCCAATAATCCCGACCTGC  >  7:341641/1‑149                                                                                                                                                                                                                                                                                                             GTTGTAGATGGTTTCGGCGACACGTCGCAGGTCGGGATTATTGGGGAAGTCCCACATCACGCCATGGCCCCCGGTGAAGTAGATGACGCCGAACTGGGACGGATCGATATCTGCGATCGGCAGCGTGTTCTGCAAGCGGGCGCGAAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3390015‑3390166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggccgCGCGTGAGCATTTGCAGTCCCCGGCCTTTCGCGCCCGCTTGCAGAACACGCTGCCGATCGCAGATATCGATCCGTCCCAGTTCGGCGTCATCTACTTCACCGGGGGCCATGGCGTGATGTGGGACTTCCCCAATAATCCCGACCTGC  <  NC_002947/3390187‑3390041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.