New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3864770 =	59 (0.820)	5 (0.070)	5/256	NT	8.0%	coding (875/1320 nt)	PP_3414	methyl‑accepting chemotaxis transducer/sensory box protein
	?	NC_002947	3864808 =	59 (0.860)					coding (837/1320 nt)	PP_3414	methyl‑accepting chemotaxis transducer/sensory box protein

CAGCAAGGGCCGCCTGTGCAAAGTGGTCAAGTTTGCCAGCGACATCACCCATCAGGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3864919‑3864770 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggcATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCGCTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGT  >  NC_002947/3864808‑3864932                                                                                                                                                                                                                                                                                     CAGCAAGGGCCGCCTGTGCAAAGTGGTCAAGTTTGCCAGCGACATCACCCATCAGGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGG                                                                                                                                <  5:119434/149‑1                                TTTGCCAGCGACATCACCCATCAGGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGG                                                                                                                                >  5:59876/1‑118                                TTTGCCAGCGACATCACCCATCAGGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGG                                                                                                                                <  6:59876/118‑1                                                                                           TGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCTGGCATGGGCGGCATGGGCGGCGCTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCA                                      >  1:190414/1‑149                                                                                                             CGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCGCTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCT                    >  1:425002/1‑149                                                                                                                TGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCGCTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGC                 >  8:26852/1‑149                                                                                                                  CCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCACGGGCGGCGCTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGTCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTG               >  8:94944/1‑149                                                                                                                               GGGGACCGAAGTGGTGCAGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCGCTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGT  <  2:425002/149‑1                                                                                                                                                                                                                                                                                     CAGCAAGGGCCGCCTGTGCAAAGTGGTCAAGTTTGCCAGCGACATCACCCATCAGGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3864919‑3864770 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggcATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCGCTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGT  >  NC_002947/3864808‑3864932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.