New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4093560 =	53 (0.740)	4 (0.060)	4/262	NT	6.3%	coding (557/1581 nt)	PP_3602	2,5‑dioxovalerate dehydrogenase
	?	NC_002947	4093624 =	67 (0.960)					coding (621/1581 nt)	PP_3602	2,5‑dioxovalerate dehydrogenase

GCTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4093622‑4093560 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGTTGGCTTCACCGGCTCGCTGAAAGGCGGTGATGCCCTTTGCCGCATGGCCGCTGAGCGCCC  >  NC_002947/4093624‑4093770                                                                                                                                                                                                                    GCTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGG                                                               >  4:192585/1‑149  CTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGT                                                              >  6:60525/1‑149                  ATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGTTGGCTTCACCGGCTCG                                              <  3:192585/149‑1                       GCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGTTGGCTTCACCGGCTCGCTGAA                                         <  5:60525/149‑1                                                              CGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGTTGGCTTCACCGGCTCGCTGAAAGGCGGTGATGCCCTTTGCCGCATGGCCGCTGAGCGCCC  <  3:108165/149‑1                                                              CGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGTTGGCTTCACCGGCTCGCTGAAAGGCGGTGATGCCCTTTGCCGC                   <  7:177420/132‑1                                                              CGGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGTTGGCTTCACCGGCTCGCTGAAAGGCGGTGATGCCCTTTGCCGC                   >  8:177420/1‑132                                                                                                                                                                                                                    GCTCAGCGGCGCGCACGATGGCGCAGGCGACCAGGTCGGCCGTGGCCATGTGGCCGCTGTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4093622‑4093560 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGACCGGCATGCCCAAGGGCGTGTTCAACATGGTATTTGGTGGCGGCGTGGGCGAGTGGCTGGTCAAGCACCCGGCCATCCAGGCGGTTGGCTTCACCGGCTCGCTGAAAGGCGGTGATGCCCTTTGCCGCATGGCCGCTGAGCGCCC  >  NC_002947/4093624‑4093770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.