| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4262151 | 67 (0.940) | 5 (0.070) | 5/252 | NT | 6.4% | coding (611/2460 nt) | PP_3734 | ABC transporter permease |
| ? | NC_002947 | = 4262198 | 83 (1.230) | coding (564/2460 nt) | PP_3734 | ABC transporter permease | |||||
AATGAACAAGCCGACGACGAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4261997‑4262151‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggccaCGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGGCCGATACCCCCGGGCCGTTGCCTGCGGATATCGCCCGCTATCTTGAACTGCAGCCGCGGCAGGACGATGGTGGCTTGCAGCGCCTGACCGACAGTTTC < NC_002947/4262198‑4262051 AATGAACAAGCCGACGACGAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTAT > 2:412710/1‑149AATGAACAAGCCGACGACGAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTAT > 6:24785/1‑149 ATGAACAAGCCGACGACGAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATC < 7:245816/149‑1 AACAAGCCGACGACGAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCGGC < 1:255940/149‑1 ACAAGCCGACGACGAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCGGC < 8:62718/148‑1 ACAAGCCGACGACGAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCG < 3:12561/146‑1 ACAAGCCGACGACGAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCG > 4:12561/1‑146 CAAGCCGACGACGAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCGGCCA < 8:104576/149‑1 GAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCGGCCACGCGCAGACGTT > 3:339026/1‑149 AGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCGGCCACGCGCAGACGTTGCTGAAC > 6:167678/1‑149 GAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCGGCCACGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCT < 4:339026/149‑1 AACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCGGCCACGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGG < 1:315051/149‑1 ACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCGGCCACGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGGC < 5:167678/149‑1 ATCGGCCACGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGGCCGATACCCCCGGGCCGTTGCCTGCGGATATCGCCCGCTATCTTGAACTGCAGCCGCGGCA < 5:445304/119‑1 ATCGGCCACGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGGCCGATACCCCCGGGCCGTTGCCTGCGGATATCGCCCGCTATCTTGAACTGCAGCCGCGGCA > 6:445304/1‑119 TCGGCCACGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGGCCGATACCCCCGGGCCGTTGCCTGCGGATATCGCCCGCTATCTTGAACTGCAGCCGCGGCAGGACGATGGTGGCTTGCAGCGCCTGACCGAC < 7:264814/149‑1 GGCCACGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGGCCGATACCCCCGGGCCGTTGCCTGCGGATATCGCCCGCTATCTTGAACTGCAGCCGCGGCAGGACGATGGTGGCTTGCAGCGCCTGACCGACA < 3:28487/148‑1 ACGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGGCCGATACCCCCGGGCCGTTGCCTGCGGATATCGCCCGCTATCTTGAACTGCAGCCGCGGCAGGACGATGGTGGCTTGCAGCGCCTGACCGACAGTTTC > 5:340680/1‑149 ACGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGGCCGATACCCCCGGGCCGTTGCCTGCGGATATCGCCCGCTATCTTGAACTGCAGCCGCGGCAGGACGATGGTGGCTTG < 7:319993/128‑1 ACGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGGCCGATACCCCCGGGCCGTTGCCTGCGGATATCGCCCGCTATCTTGAACTGCAGCCGCGGCAGGACGATGGTGGCTTG > 8:319993/1‑128 AATGAACAAGCCGACGACGAACGCCAGCAGGCCGAGCGCGGTCAGGTCGAGGTGGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGGTATCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4261997‑4262151‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggccaCGCGCAGACGTTGCTGAACGCACCGGGGCAGTTGTCTCGTCTGCTGCTGGCCGATACCCCCGGGCCGTTGCCTGCGGATATCGCCCGCTATCTTGAACTGCAGCCGCGGCAGGACGATGGTGGCTTGCAGCGCCTGACCGACAGTTTC < NC_002947/4262198‑4262051 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |