BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4262151	67 (0.940)	5 (0.070)	5/252	NT	6.4%	coding (611/2460 nt)	PP_3734	ABC transporter permease
*	?	NC_002947	= 4262198	83 (1.230)	5 (0.070)	5/252	NT	6.4%	coding (564/2460 nt)	PP_3734	ABC transporter permease

Only 100 of 101 total aligned reads displayed.

GGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGTCCAACCCAGGCTTGCC  >  NC_002947/4262050‑4262343

ggAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGcgcg                                                                                                                                                   >  8:394353/1‑149 (MQ=255)

 gAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGt                                                                                                                                                  >  5:340680‑M2/1‑148 (MQ=255)

      tGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGtggcc                                                                                                                                              <  3:28487‑M2/148‑6 (MQ=255)

       gTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGtggccga                                                                                                                                            <  7:264814‑M2/149‑8 (MQ=255)

          ggTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGt                                                                                                                                         <  6:343094/149‑1 (MQ=255)

              aGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCCGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTcca                                                                                                                                      >  1:321121/1‑148 (MQ=255)

                gcgcTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTccacca                                                                                                                                   >  3:140712/1‑149 (MQ=255)

                   cTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGa                                                                                                                                <  7:394353/149‑1 (MQ=255)

                    tGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGAt                                                                                                                               >  1:266103/1‑149 (MQ=255)

                      cAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGt                                                                                                                                                  >  8:319993‑M2/1‑127 (MQ=255)

                      cAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGt                                                                                                                                                  <  7:319993‑M2/128‑2 (MQ=255)

                      cAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGAt                                                                                                                               <  2:161245/147‑1 (MQ=255)

                       aaGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGAc                                                                                                                            >  3:98947/1‑149 (MQ=255)

                        aGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGAcc                                                                                                                           <  4:72760/149‑1 (MQ=255)

                           caccaTCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCg                                                                                                                        >  7:186448/1‑149 (MQ=255)

                           caccaTCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCg                                                                                                                        >  7:222607/1‑149 (MQ=255)

                              caTCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGt                                                                                                                     >  6:147570/1‑149 (MQ=255)

                                      tGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGtggccgat                                                                                                                                           >  6:445304‑M2/1‑111 (MQ=255)

                                      tGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGtggccgat                                                                                                                                           <  5:445304‑M2/119‑9 (MQ=255)

                                       gCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACg                                                                                                              >  8:167635/1‑147 (MQ=255)

                                       gCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACg                                                                                                              >  8:24520/1‑147 (MQ=255)

                                        ccGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAg                                                                                                           >  3:155782/1‑149 (MQ=255)

                                         cgcgGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAgg                                                                                                          <  4:240533/149‑1 (MQ=255)

                                           cgGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCt                                                                                                        <  8:326746/149‑1 (MQ=255)

                                               tGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCa                                                                                                     >  8:111406/1‑148 (MQ=255)

                                               tGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCa                                                                                                     >  3:18803/1‑148 (MQ=255)

                                                  aGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCTGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAAc                                                                                                 <  2:22663/149‑1 (MQ=255)

                                                    ttCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCa                                                                                               >  2:366955/1‑149 (MQ=255)

                                                    ttCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCa                                                                                               >  6:343742/1‑149 (MQ=255)

                                                         gATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGAGCCAACGCAGGCTGCAAAACCATAggc                                                                                          <  1:240158/149‑1 (MQ=255)

                                                          aTAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCAGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAggcg                                                                                         >  2:408278/1‑149 (MQ=255)

                                                           tAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAggcg                                                                                         <  4:37108/148‑1 (MQ=255)

                                                               gggCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCAGCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGgcag                                                                                     >  1:363616/1‑148 (MQ=255)

                                                                 gCGATATCCGCAGGCAACGGCCCGGGGGTTATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGgcagc                                                                                    >  1:246117/1‑148 (MQ=255)

                                                                 gCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCaa                                                                                  >  7:314539/1‑149 (MQ=255)

                                                                   gATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACt                                                                                <  8:222607/149‑1 (MQ=255)

                                                                       tCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGccc                                                                            <  4:28487/149‑1 (MQ=255)

                                                                       tCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGccc                                                                            <  8:186448/149‑1 (MQ=255)

                                                                         cGCATGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCtt                                                                          >  6:306682/1‑149 (MQ=255)

                                                                         cGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCtt                                                                          <  7:167977/149‑1 (MQ=255)

                                                                         cGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCtt                                                                          >  7:173109/1‑149 (MQ=255)

                                                                           cAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCa                                                                        <  8:314539/149‑1 (MQ=255)

                                                                           cAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCa                                                                        <  5:24785/149‑1 (MQ=255)

                                                                           cAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCa                                                                        <  7:167635/149‑1 (MQ=255)

                                                                                   ggCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTcgcg                                                                <  4:18803/149‑1 (MQ=255)

                                                                                    gCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCgg                                                               <  5:147570/149‑1 (MQ=255)

                                                                                      ccGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTcgc                                                                 >  1:250190/1‑145 (MQ=255)

                                                                                      ccGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTcgc                                                                 <  2:250190/145‑1 (MQ=255)

                                                                                       cGGGGT‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTc                                                            >  3:392938/1‑149 (MQ=255)

                                                                                         gggg‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCgg                                                          <  4:140712/149‑1 (MQ=255)

                                                                                         gggg‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCgg                                                          <  7:111406/149‑1 (MQ=255)

                                                                                         gggg‑TAGCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCgg                                                          <  7:156131/149‑1 (MQ=255)

                                                                                                tCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATcc                                                    >  3:110890/1‑149 (MQ=255)

                                                                                                  ggCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCgg                                                  >  6:97934/1‑149 (MQ=255)

                                                                                                  ggCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCgg                                                  <  8:173109/149‑1 (MQ=255)

                                                                                                  ggCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCg                                                   <  4:155782/148‑1 (MQ=255)

                                                                                                   gCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGtggccgatacccccgggccgttgcctgcggatatcgcccgctatcttgaactgcagccgcggcaggacgatggtggcttgcagcgcctgaccgacagt                                                 <  5:167678‑M2/149‑99 (MQ=255)

                                                                                                   gCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCggg                                                 >  5:35072/1‑149 (MQ=255)

                                                                                                    ccAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGtggccgatacccccgggccgttgcctgcggatatcgcccgctatcttgaactgcagccgcggcaggacgatggtggcttgcagcgcctgaccgacagtt                                                <  1:315051‑M2/149‑100 (MQ=255)

                                                                                                    ccAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCgggg                                                <  5:75244/149‑1 (MQ=255)

                                                                                                     cagcagcagACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCGGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGc                                               <  5:171796/149‑1 (MQ=255)

                                                                                                     cagcagcagACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGc                                               <  5:97934/149‑1 (MQ=255)

                                                                                                      agcagcagACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGtggccgatacccccgggccgttgcctgcggatatcgcccgctatcttgaactgcagccgcggcaggacgatggtggcttgcagcgcctgaccgacagtttc                                              <  4:339026‑M2/149‑102 (MQ=255)

                                                                                                         agcagACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTtgt                                           <  2:363616/149‑1 (MQ=255)

                                                                                                          gcagACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTtgtg                                          <  1:366955/149‑1 (MQ=255)

                                                                                                          gcagACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTtgtg                                          <  4:98947/149‑1 (MQ=255)

                                                                                                            agACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGtt                                        <  5:307683/149‑1 (MQ=255)

                                                                                                            agACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGtt                                        >  6:307683/1‑149 (MQ=255)

                                                                                                            agACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGtt                                        <  6:35072/149‑1 (MQ=255)

                                                                                                            agACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGT‑CACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGtt                                        >  6:202502/1‑148 (MQ=255)

                                                                                                              aCGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCa                                      <  1:412710/149‑1 (MQ=255)

                                                                                                              aCGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGACCTTCACTGTCGCGGGTCGGCGAGCCGGGGCTTGTGtt                                        >  1:291388/1‑147 (MQ=255)

                                                                                                               cGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAg                                     <  8:240663/149‑1 (MQ=255)

                                                                                                                gagaCAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGt                                    >  5:385949/1‑149 (MQ=255)

                                                                                                                gagaCAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGt                                    >  3:83489/1‑149 (MQ=255)

                                                                                                                gagaCAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGT‑CACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGtt                                   <  5:202502/149‑1 (MQ=255)

                                                                                                                 agaCAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGc                                                         <  7:76630/127‑1 (MQ=255)

                                                                                                                   aCAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGa                                 <  7:218823/149‑1 (MQ=255)

                                                                                                                    cAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGAc                                <  4:83489/149‑1 (MQ=255)

                                                                                                                          ccccGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCaa                            <  5:28201/147‑1 (MQ=255)

                                                                                                                          ccccGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAgg                          >  7:409993/1‑149 (MQ=255)

                                                                                                                          ccccGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAgg                          >  3:267693/1‑149 (MQ=255)

                                                                                                                            ccGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGgtg                        >  7:129068/1‑149 (MQ=255)

                                                                                                                               gTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCg                                                   >  7:23164/1‑119 (MQ=255)

                                                                                                                               gTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCg                                                   <  8:23164/119‑1 (MQ=255)

                                                                                                                                  cGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGt                  <  2:124110/149‑1 (MQ=255)

                                                                                                                                   gTTCAGCAACGTCTGCGCGtggccgatacccccgggccgttgcctgcggatatcgcccgctatcttgaactgcagccgcggcaggacgatggtggcttgcagcgcctgaccgacagtttccacctcgacctgaccgcgctcggcctgct                 >  6:167678‑M2/1‑19 (MQ=255)

                                                                                                                                   gTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGTGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGTc                 <  2:266103/149‑1 (MQ=255)

                                                                                                                                   gTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAg                           >  7:164268/1‑139 (MQ=255)

                                                                                                                                   gTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAg                           <  8:164268/139‑1 (MQ=255)

                                                                                                                                    ttCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGTc                 >  6:139455/1‑148 (MQ=255)

                                                                                                                                    ttCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGTc                 <  5:139455/148‑1 (MQ=255)

                                                                                                                                     tCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGTcc                >  2:169555/1‑148 (MQ=255)

                                                                                                                                          aaCGTCTGCGCGtggccgatacccccgggccgttgcctgcggatatcgcccgctatcttgaactgcagccgcggcaggacgatggtggcttgcagcgcctgaccgacagtttccacctcgacctgaccgcgctcggcctgctggcgttc          >  3:339026‑M2/1‑12 (MQ=255)

                                                                                                                                          aaCGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGTCCAAcc            >  6:371843/1‑147 (MQ=255)

                                                                                                                                            cGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGTCCAACCCAgg        <  5:209301/149‑1 (MQ=255)

                                                                                                                                             gTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGTCCAACCCAGGc       <  4:110890/149‑1 (MQ=255)

                                                                                                                                                  cgcgTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGTCCAACCCAGGCTTGcc  <  4:267693/149‑1 (MQ=255)

                                                                                                                                                     gTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAg                           <  3:329056/121‑1 (MQ=255)

                                                                                                                                                     gTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAg                           >  4:329056/1‑121 (MQ=255)

GGAAACTGTCGGTCAGGCGCTGCAAGCCACCATCGTCCTGCCGCGGCTGCAGTTCAAGATAGCGGGCGATATCCGCAGGCAACGGCCCGGGGG‑TATCGGCCAGCAGCAGACGAGACAACTGCCCCGGTGCGTTCAGCAACGTCTGCGCGTGGCCGATGTCCACCACGATGACCCCGGGTGCCAACGCAGGCTGCAAAACCATAGGCGGCAGCAACTGCCCTTCACTGTCGCGGGTCGGCGATCCGGGGCTTGTGTTCAGTTGACGCAAGGTGTCTGGTCCAACCCAGGCTTGCC  >  NC_002947/4262050‑4262343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.