| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4329440 = | 55 (0.770) | 3 (0.040) | 3/258 | NT | 5.3% | coding (371/570 nt) | PP_3800 | hypothetical protein |
| ? | NC_002947 | 4329476 = | 54 (0.780) | coding (407/570 nt) | PP_3800 | hypothetical protein | |||||
TGCTGCCAGCCAGCGGCGATCAGGGCGGCCTGGCCGAGGTCGTCCGGGATCACGGCGGCGCTGTCGCGGCGCAGCCAGACATCGGCTTGGCCTGTGCTGTCGGGTGGCAGGATCAGCAGCAGGCTGCCGGCAACTTCCGGGGCCTGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4329590‑4329440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcTGATCCTGCCACCCGACAGCACAGGCCAAGCCGATGTCTGGCTGCGCCGCGACAGCGCCGCCGTGATCCCGGACGACCTCGGCCAGGCCGCCCTGATCGCCGCTGGCTGGCAGCAGGTGGTCAGCCACTACGACGCCGGTGTTACCC > NC_002947/4329476‑4329622 TGCTGCCAGCCAGCGGCGATCAGGGCGGCCTGGCCGAGGTCGTCCGGGATCACGGCGGCGCTGTCGCGGCGCAGCCAGACATCGGCTTGGCCTGTGCTGTCGGGTGGCAGGATCAGCAGCAGGCTGCCGGCAACTTCCGGGGCCTGGCT > 8:99749/1‑149 CTGCCAGCCAGCGGCGATCAGGGCGGCCTGGCCGAGGTCGTCCGGGATCACGGCGGCGCTGTCGCGGCGCAGCCAGACATCGGCTTGGCCTGTGCTGTCGGGTGGCAGGATCAGCAGCAGGCTGCCGGCAACTTCCGGGGCCTGGCTGC < 4:270649/149‑1 AGCAGCAGGCTGCCGGCAACTTCCGGGGCCTGGCTGCTGATCCTGCCACCCGACAGCACAGGCCAAGCCGATGTCTGGCTGCGCCGCGACAGCGCCGCCGTGATCCCGGACGACCTCG > 7:42479/1‑118 AGCAGCAGGCTGCCGGCAACTTCCGGGGCCTGGCTGCTGATCCTGCCACCCGACAGCACAGGCCAAGCCGATGTCTGGCTGCGCCGCGACAGCGCCGCCGTGATCCCGGACGACCTCG < 8:42479/118‑1 CAGCAGGCTGCCGGCAACTTCCGGGGCCTGGCTGCTGATCCTGCCACCCGACAGCACAGGCCAAGCCGATGTCTGGCTGCGCCGCGACAGCGCCGCCGTGATCCCGGACGACCTCGGCCAGGCCGCCCTGATCGCCGCTGGCTGGCAG > 3:285762/1‑148 GCTGATCCTGCCACCCGACAGCACAGGCCAAGCCGATGTCTGGCTGCGCCGCGACAGCGCCGCCGTGATCCCGGACGACCTCGGCCAGGCCGCCCTGATCGCCGCTGGCTGGCAGCAGGTGGTCAGCCACTACGACGCCGGTGTTACCC > 6:242222/1‑149 TGCTGCCAGCCAGCGGCGATCAGGGCGGCCTGGCCGAGGTCGTCCGGGATCACGGCGGCGCTGTCGCGGCGCAGCCAGACATCGGCTTGGCCTGTGCTGTCGGGTGGCAGGATCAGCAGCAGGCTGCCGGCAACTTCCGGGGCCTGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4329590‑4329440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcTGATCCTGCCACCCGACAGCACAGGCCAAGCCGATGTCTGGCTGCGCCGCGACAGCGCCGCCGTGATCCCGGACGACCTCGGCCAGGCCGCCCTGATCGCCGCTGGCTGGCAGCAGGTGGTCAGCCACTACGACGCCGGTGTTACCC > NC_002947/4329476‑4329622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |