| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4766011 = | 53 (0.740) | 3 (0.040) | 3/256 | NT | 5.4% | coding (664/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
| ? | NC_002947 | 4766109 = | 55 (0.800) | coding (762/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA | |||||
TGACGCTGCCCTGGAAATCCTTGGTAGGGCGTTTGCGCACCATGTTGATGGCTGCCGACGGGTTGCCGGCACCTTGCATCATGCCGGTGGCGCCCCGCACGATCTCGACGCGGTCGTAGGGCGCCATGTCGGCCGCGGCGACCCAGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4766161‑4766011‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGC > NC_002947/4766109‑4766256 TGACGCTGCCCTGGAAATCCTTGGTAGGGCGTTTGCGCACCATGTTGATGGCTGCCGACGGGTTGCCGGCACCTTGCATCATGCCGGTGGCGCCCCGCACGATCTCGACGCGGTCGTAGGGCGCCATGTCGGCCGCGGCGACCCAGTCG > 7:222330/1‑149 GCCGACGGGTTGCCGGCACCTTACATCATGCCGGTGGCGCCCCGCACGATCTCGACGCGGTCGTAGGGCGCCATGTCGGCCGCGGCGACCCAGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGT > 4:158092/1‑149 CGACGGGTTGCCGGCACCTTGCATCATGCCGGTGGCGCCCCGCACGATCTCGACGCGGTCGTAGGGCGCCATGTCGGCCGCGGCGACCCAGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCA > 6:352172/1‑149 TGCCGGTGGCGCCCCGCACGATCTCGACGCGGTCGTAGGGCGCCATGTCGGCCGCGGCGACCCAGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAAT < 3:158092/149‑1 TCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGT < 6:93798/149‑1 GGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCG > 5:238580/1‑149 CAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGC < 4:322654/149‑1 TGACGCTGCCCTGGAAATCCTTGGTAGGGCGTTTGCGCACCATGTTGATGGCTGCCGACGGGTTGCCGGCACCTTGCATCATGCCGGTGGCGCCCCGCACGATCTCGACGCGGTCGTAGGGCGCCATGTCGGCCGCGGCGACCCAGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4766161‑4766011‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGC > NC_002947/4766109‑4766256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |