New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4766011 =	53 (0.740)	3 (0.040)	3/256	NT	5.4%	coding (664/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA
	?	NC_002947	4766109 =	55 (0.800)					coding (762/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA

CGACCAGTCGATGCGTAGCCTCGACGACGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTC  >  NC_002947/4765863‑4766148                                                                                                                                                     |                                                                                                                                          gccgacgaagcggccacggacgctgccgttgtcattcagtgggccgctgagatcgagttcgccgcggtaattgtcccagctgccggccgagccggtgacgctgccctggaaatccttggtagggcgtttgcgcaccatgttgatggctg                                                                                                                                           <  4:322654‑M1/1‑1 (MQ=255)   cgacgaagcggccacggacgctgccgttgtcattcagtgggccgctgagatcgagttcgccgcggtaattgtcccagctgccggccgagccggtgacgctgccctggaaatccttggtagggcgtttgcgcaccatgttgatggctGcc                                                                                                                                         >  5:238580‑M1/147‑149 (MQ=255)     acgaagcggccacggacgctgccgttgtcattcagtgggccgctgagatcgagttcgccgcggtaattgtcccagctgccggccgagccggtgacgctgccctggaaatccttggtagggcgtttgcgcaccatgttgatggctGCCGa                                                                                                                                       <  6:93798‑M1/5‑1 (MQ=255)        tCGATGCGTAGCCTCGACGACGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCCCCTACAACGCCGCCTg                                                                                                                                    >  4:44987/1‑149 (MQ=255)          gATGCGTAGCCTCGACGACGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACATCCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTggg                                                                                                                                  <  1:91184/149‑1 (MQ=255)          gATGCGTAGCCTCGACGACGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTgg                                                                                                                                   <  5:82430/148‑1 (MQ=255)                tAGCCTCGACGACGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTcgccg                                                                                                                            >  5:433586/1‑149 (MQ=255)                tAGCCTCGACGACGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTcgccg                                                                                                                            >  7:44330/1‑149 (MQ=255)                tAGCCTCGACGACGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTcgccg                                                                                                                            >  7:168937/1‑149 (MQ=255)                      cgacgaCGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATAGCCTGCCCACCACCTACAACGc                                                                                                                                          <  7:64762/129‑1 (MQ=255)                      cgacgaCGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCAGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGc                                                                                                                                          >  8:64762/1‑129 (MQ=255)                       gacgacGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGcc                                                                                                                       <  8:44330/147‑1 (MQ=255)                                gTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGgcgc                                                                                                             <  5:406402/148‑1 (MQ=255)                                              tGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGCCATGGCGCCCTACGACCGCGTc                                                                                               >  7:178446/1‑148 (MQ=255)                                                gTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCga                                                                                             <  3:368611/148‑1 (MQ=255)                                                gTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCg                                                                                              <  8:168937/147‑1 (MQ=255)                                                   tGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGCTGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTc                                                                                               >  4:376912/1‑143 (MQ=255)                                                       cATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGc                                                                                     >  2:48587/1‑149 (MQ=255)                                                              gCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCgaga                                                                                           <  2:434077/136‑1 (MQ=255)                                                              gCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCgaga                                                                                           >  1:434077/1‑136 (MQ=255)                                                              gCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGgcgc                                                                              >  6:302615/1‑149 (MQ=255)                                                                 gcgcgcCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCAc                                                                           >  3:322654/1‑149 (MQ=255)                                                                     gcCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCgg                                                                        >  8:140656/1‑148 (MQ=255)                                                                     gcCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCgg                                                                        >  8:222330/1‑148 (MQ=255)                                                                      attgtcccagctgccggccgagccggtgacgctgccctggaaatccttggtagggcgtttgcgcaccatgttgatggctGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCa                                                                      <  3:158092‑M1/70‑1 (MQ=255)                                                                         ggCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCatga                                                                   >  1:25365/1‑149 (MQ=255)                                                                          gCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGcatcat                                                                  >  4:114647/1‑149 (MQ=255)                                                                            cAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCatgatg                                                                 >  5:327881/1‑148 (MQ=255)                                                                            cAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGc                                                                <  1:48587/149‑1 (MQ=255)                                                                               cAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAg                                                             <  5:244480/149‑1 (MQ=255)                                                                                     gTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCg                                                       <  5:302615/149‑1 (MQ=255)                                                                                      tACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCgg                                                      >  3:345253/1‑149 (MQ=255)                                                                                           ttCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAAc                                                  <  4:119381/148‑1 (MQ=255)                                                                                              ccGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGt                                              >  4:99314/1‑149 (MQ=255)                                                                                               cgcgGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCg                                                       >  5:267879/1‑139 (MQ=255)                                                                                               cgcgGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCg                                                       <  6:267879/139‑1 (MQ=255)                                                                                                tgacgctgccctggaaatccttggtagggcgtttgcgcaccatgttgatggctGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCg                                            >  6:352172‑M1/54‑149 (MQ=255)                                                                                                gcgGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCg                                            >  2:363902/1‑149 (MQ=255)                                                                                                gcgGCTTTCACATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCg                                            <  6:327881/149‑1 (MQ=255)                                                                                                 cgGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCgg                                           <  1:339362/149‑1 (MQ=255)                                                                                                  acgctgccctggaaatccttggtagggcgtttgcgcaccatgttgatggctGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGTAAGGTGCCGGCAACCCGTCGGc                                          >  4:158092‑M1/52‑149 (MQ=255)                                                                                                       tCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGTTGCCGGCAACCCGTCGGCAGcc                                      <  7:89442/148‑1 (MQ=255)                                                                                                         ccATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCAGGCAACCCGTCGGCAGCCAt                                    >  6:247837/1‑148 (MQ=255)                                                                                                          cATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATc                                   >  1:384763/1‑148 (MQ=255)                                                                                                          cATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCa                                  <  2:25365/149‑1 (MQ=255)                                                                                                          cATCAACAACCTGATGTTCGATGGCCTGCCAACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATc                                   >  8:250477/1‑148 (MQ=255)                                                                                                               acaacCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAg                                                             >  6:395515/1‑117 (MQ=255)                                                                                                               acaacCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAg                                                             <  5:395515/117‑1 (MQ=255)                                                                                                               acaacCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATg                             <  6:433586/149‑1 (MQ=255)                                                                                                                 aacCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGt                           <  3:99314/149‑1 (MQ=255)                                                                                                                   ccTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTgc                         >  5:444881/1‑149 (MQ=255)                                                                                                                   ccTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGACAGCCATCAACATGGTgc                         >  7:407782/1‑149 (MQ=255)                                                                                                                         gTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAAc                   >  5:85785/1‑149 (MQ=255)                                                                                                                          ttCGATGGCCTGCCCACCACCTACACCGCCGACTGGGGCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATGGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAAc                   <  7:342796/148‑1 (MQ=255)                                                                                                                              aTGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGccc               >  5:360941/1‑148 (MQ=255)                                                                                                                                 gCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTAc            <  2:384763/148‑1 (MQ=255)                                                                                                                                 gCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTAc            <  5:247837/148‑1 (MQ=255)                                                                                                                                  ccTGCCCACCACCTACAACGCCGACTGGGTCGCCGAGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTAcc           >  7:326336/1‑148 (MQ=255)                                                                                                                                   cTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCaa         <  2:102332/149‑1 (MQ=255)                                                                                                                                      cccACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGa      >  4:309252/1‑149 (MQ=255)                                                                                                                                          ccaccTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTc  <  7:140656/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                          CGACCAGTCGATGCGTAGCCTCGACGACGTGGTCCAGGCCACTCCTGGTCTGCGCATGTCGGCCGCGCGCCCGGCCAACAGCGAGTACTTTTCCCGCGGCTTTCCCATCAACAACCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTC  >  NC_002947/4765863‑4766148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.