| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4860126 = | 97 (1.350) | 5 (0.080) | 3/246 | NT | 5.4% | coding (924/2331 nt) | ligA | DNA ligase |
| ? | NC_002947 | 4860172 = | 87 (1.320) | coding (878/2331 nt) | ligA | DNA ligase | |||||
AAACATGCGGCGGGCATCGAAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4860284‑4860126‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctgggc‑gGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCTTGA > NC_002947/4860172‑4860319 AAACATGCGGCGGGCATCGAAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCC < 5:47451/149‑1AAACATGCGGCGGGCATCGAAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCC < 1:85708/149‑1AAACATGCGGCGGGCATCGAAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCC > 4:350498/1‑149AAACATGCGGCGGGCATCGAAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCC > 2:357867/1‑149AAACATGCGGCGGGCATCGAAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTACGCGCCCGTGAGCC > 1:219857/1‑149AAACATGCGGCGGGCATCGAAGAGCGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCC > 2:337074/1‑149 ACATGCGGCGGGCATCTACGAGTGCATGGCCTACTATCTCGACATTTGCGAGCGGCTTAACAGCCTGCCGTATTATATCGAGGGGGTAGTGTTCAAGGTCAACATCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGC < 1:225954/149‑1 ACATGCGGCGGGCATCGAAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGC > 1:114691/1‑149 ATGCGGCGGGCATCGAAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGC < 3:422994/149‑1 GGCGGGCATCGAAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGG > 3:58331/1‑149 AAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCT < 8:211286/135‑1 AAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCT > 7:211286/1‑135 GCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGC‑GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGC > 5:346476/1‑149 CCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGC‑GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCC > 3:228575/1‑149 CCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGC‑GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCC > 5:106098/1‑149 CCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCC > 1:83905/1‑149 CCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGC‑GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCG > 1:57248/1‑149 GCGCTGGGC‑GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCC > 2:245112/1‑148 CGCTGGGC‑GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCA < 1:406965/149‑1 GCTGGGC‑GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAG > 5:260971/1‑149 GCTGGGC‑GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAG > 5:266981/1‑149 GGC‑GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCT > 6:225350/1‑149 C‑GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCTT > 4:354721/1‑148 GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCTTGA < 3:354721/149‑1 GGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCTTGA < 2:85708/149‑1 AAACATGCGGCGGGCATCGAAGAGTGCCTGGCCTACTATCGCGACATTGGCGAGCGGCGTAACAGCCTGCCGTATGAGATCGACGGGGTAGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4860284‑4860126‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctgggc‑gGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCTTGA > NC_002947/4860172‑4860319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |