New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4860126 =97 (1.350)5 (0.080) 3/246 NT 5.4% coding (924/2331 nt) ligA DNA ligase
?NC_002947 4860172 = 87 (1.320)coding (878/2331 nt) ligA DNA ligase

Only 100 of 121 total aligned reads displayed.

TTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCTTGAG  >  NC_002947/4860025‑4860320
                                                                                                                                                   |                                                                                                                                                     
ttCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGggcggc                                                                                                                                                      >  3:283300/1‑149 (MQ=255)
ttCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGggcggc                                                                                                                                                      >  3:414567/1‑149 (MQ=255)
   aGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCa                                                                                                                                                    <  5:169192/148‑1 (MQ=255)
   aGCCGCCCCACAGGCGATACTGCACCCGTACCGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCTGCACACGGGCGCGGAAGCCCAGCTCGCCCTGGGCCGCCAg                                                                                                                                                   >  8:365197/1‑149 (MQ=255)
    gCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAgg                                                                                                                                                  >  2:219857/1‑149 (MQ=255)
      cgcgCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCt                                                                                                                                                <  1:245288/149‑1 (MQ=255)
      cgcgCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCt                                                                                                                                                <  8:340385/149‑1 (MQ=255)
       gcgcCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑g                                                                                                                                              >  8:396345/1‑149 (MQ=255)
        cgcCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑Gt                                                                                                                                             <  8:15001/149‑1 (MQ=255)
         gcCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑Gtt                                                                                                                                            <  5:18252/149‑1 (MQ=255)
           cacaGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGa                                                                                                                                          >  5:28021/1‑149 (MQ=255)
                  gTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGaa                                                                                                                                   <  2:283410/149‑1 (MQ=255)
                  gTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGaa                                                                                                                                   <  4:261772/149‑1 (MQ=255)
                     aCTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAacac                                                                                                                                >  4:362236/1‑149 (MQ=255)
                       tGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTa                                                                                                                              >  4:72854/1‑149 (MQ=255)
                       tGCACCCGTACGGCCAACCTGGAACTCGAAAACCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCCCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTa                                                                                                                              >  5:199773/1‑149 (MQ=255)
                         cACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTAcc                                                                                                                            >  7:120906/1‑149 (MQ=255)
                          aCCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTAccc                                                                                                                           >  1:106038/1‑149 (MQ=255)
                           cccGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCtt                                                                                                                                      <  4:108370/137‑1 (MQ=255)
                           cccGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCtt                                                                                                                                      >  3:108370/1‑137 (MQ=255)
                                  ggCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGAtc                                                                                                                   <  5:189520/149‑1 (MQ=255)
                                    ccAACCTGGAACTCGACATCCAGCACCTCGGTCTGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGAtctc                                                                                                                 <  1:409220/149‑1 (MQ=255)
                                     cAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCa                                                                                                                >  1:9450/1‑149 (MQ=255)
                                      aaCCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCa                                                                                                                >  1:263635/1‑148 (MQ=255)
                                        ccTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATAc                                                                                                             <  7:8355/149‑1 (MQ=255)
                                         cTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTAcc                                                                                                                            <  6:20021/133‑1 (MQ=255)
                                          tGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACgg                                                                                                           >  1:13948/1‑149 (MQ=255)
                                              aCTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAgg                                                                                                                                                  <  7:215457/107‑1 (MQ=255)
                                              aCTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAgg                                                                                                                                                  >  8:215457/1‑107 (MQ=255)
                                                 cGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGACGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGCACACTACCCCGTCGATCTCATACGGCAGGCTg                                                                                                    >  4:284490/1‑149 (MQ=255)
                                                  gACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGt                                                                                                   <  4:231203/149‑1 (MQ=255)
                                                    cATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTa                                                                                                 <  8:107598/149‑1 (MQ=255)
                                                        cAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTAcgcc                                                                                             >  1:357867/1‑149 (MQ=255)
                                                              cTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTAGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCAAACGGCAGGCTGTTACCCAGCTCGc                                                                                       >  8:179790/1‑149 (MQ=255)
                                                                      gCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTcg                                                                               <  2:177403/149‑1 (MQ=255)
                                                                      gCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTcg                                                                               <  6:132516/149‑1 (MQ=255)
                                                                          ttCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTcgcg                                                                             <  5:337664/147‑1 (MQ=255)
                                                                          ttCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTcgcg                                                                             <  7:130362/147‑1 (MQ=255)
                                                                          ttCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTcgcg                                                                             <  2:263635/147‑1 (MQ=255)
                                                                          ttCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGa                                                                            >  7:202312/1‑148 (MQ=255)
                                                                             cATGGCCGGGAACTTG‑GGGCATTCGCCCTGCGCGGCGCACGGGCGCGGAAGCCCAGCTCGCGGTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGa                                                                            <  5:69252/144‑1 (MQ=255)
                                                                             cATGGCCGGGAACTTG‑GGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACAACCCCGTCGATCTCATACGGAAGGCTTTTACGACCCACGCCAATGTCGCGa                                                                            >  6:69252/1‑144 (MQ=255)
                                                                                ggCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAgg                                                                     >  1:437224/1‑149 (MQ=255)
                                                                                 gCCGGGAACTTGTGGGCAATCGCCCGGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGc                                                                    >  2:183666/1‑149 (MQ=255)
                                                                                  ccGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTAcgc                                                                                              <  7:373749/122‑1 (MQ=255)
                                                                                  ccGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTAcgc                                                                                              >  8:373749/1‑122 (MQ=255)
                                                                                   cGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCa                                                                  <  6:28021/149‑1 (MQ=255)
                                                                                    ggtaaCTTGTGGGAAATCGCCCAGCGCGGCTCAGGGGCGCGGAAGCCCAGCTCGGGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAg                                                                 <  2:437224/146‑1 (MQ=255)
                                                                                     ggAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTTCGCCGCTCGCCAATGTCGCGATAGTAGGCCAgg                                                                <  2:106038/149‑1 (MQ=255)
                                                                                         cTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCAc                                                             >  6:296159/1‑148 (MQ=255)
                                                                                          ttGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCActc                                                           >  3:350498/1‑149 (MQ=255)
                                                                                            gtgGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCActct                                                          <  7:396345/148‑1 (MQ=255)
                                                                                             tgGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCGAATGTCGCGATTGTAGGCCAGGCACTCTTc                                                        <  6:199773/149‑1 (MQ=255)
                                                                                             tgGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTc                                                        <  2:378258/149‑1 (MQ=255)
                                                                                               ggCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCg                                                       <  3:72854/148‑1 (MQ=255)
                                                                                                gCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGAt                                                     >  5:255102/1‑149 (MQ=255)
                                                                                                gCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGAt                                                     >  2:282677/1‑149 (MQ=255)
                                                                                                    tCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCTGGCTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCGCTCTTCGATGcc                                                  >  1:337074/1‑149 (MQ=255)
                                                                                                       cccagcgcgagctgggcttccgcgcccgtgagccgcgctgggcgGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCccgcc                                              >  5:106098‑M2/45‑149 (MQ=255)
                                                                                                       cccagcgcgagctgggcttccgcgcccgtgagccgcgctgggcgGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCccgcc                                              >  3:228575‑M2/45‑149 (MQ=255)
                                                                                                       ccagcgcgagctgggcttccgcgcccgtgagccgcgctgggcggGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCccgcc                                              >  1:83905‑M2/45‑149 (MQ=255)
                                                                                                       CCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCccgcc                                              >  3:58331‑M1/1‑149 (MQ=255)
                                                                                                        ccagcgcgagctgggcttccgcgcccgtgagccgcgctgggcgGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCccgccg                                             >  1:57248‑M2/44‑149 (MQ=255)
                                                                                                          AGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCtt                                                         >  7:211286‑M1/1‑135 (MQ=255)
                                                                                                          AGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCtt                                                         <  8:211286‑M1/135‑1 (MQ=255)
                                                                                                           GCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCAt                                          <  3:422994‑M1/149‑1 (MQ=255)
                                                                                                             GCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGt                                        >  1:114691‑M1/1‑149 (MQ=255)
                                                                                                               ggCTCACGGGCGCGGAAGCCCAGCTCGCTCTGGGCGGCCATGCT‑GTTGACCTTTAACACTACCCCGTCGATCTCATACGGAAGGATGTTCCGCCGCTATCCAATGTCTCTATAGTAGTACATTCACTATTCGATGCCCGCCGCATGttt                                      <  2:225954/149‑1 (MQ=255)
                                                                                                               GGCTCACGGGCGCGTAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGttt                                      >  1:219857‑M1/1‑149 (MQ=255)
                                                                                                               GGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGttt                                      <  5:47451‑M1/149‑1 (MQ=255)
                                                                                                               GGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGttt                                      >  2:357867‑M1/1‑149 (MQ=255)
                                                                                                               GGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGttt                                      <  1:85708‑M1/149‑1 (MQ=255)
                                                                                                               GGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGttt                                      >  4:350498‑M1/1‑149 (MQ=255)
                                                                                                                 cTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCAt                                          <  2:321085/143‑1 (MQ=255)
                                                                                                                 cTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCAt                                          >  1:321085/1‑143 (MQ=255)
                                                                                                                       ggCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTcgc                              <  1:49111/149‑1 (MQ=255)
                                                                                                                       ggCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTcgc                              <  5:353542/149‑1 (MQ=255)
                                                                                                                           cgGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGcc                          <  4:84815/149‑2 (MQ=255)
                                                                                                                            ggccgCCCAGCGCGAGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATg                                                    >  5:136387/5‑122 (MQ=255)
                                                                                                                            ggccgCCCAGCGCGAGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATg                                                    <  6:136387/118‑1 (MQ=255)
                                                                                                                            ggAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGttt                                      >  5:101612/1‑136 (MQ=255)
                                                                                                                            ggAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAg                                   >  5:84659/1‑139 (MQ=255)
                                                                                                                               aGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATc                      <  8:202312/149‑1 (MQ=255)
                                                                                                                                gCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCg                     >  4:355470/1‑149 (MQ=255)
                                                                                                                                gCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCACGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCg                     >  4:251188/1‑149 (MQ=255)
                                                                                                                                 cccAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCgg                    >  3:89554/1‑149 (MQ=255)
                                                                                                                                  ccAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCgg                            <  1:81727/140‑1 (MQ=255)
                                                                                                                                  ccAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCgg                            >  2:81727/1‑140 (MQ=255)
                                                                                                                                   cAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTATTCGATGCCAGCCGCATGTTTGAGCTCGCGGCTGATCgg                    >  5:7246/1‑147 (MQ=255)
                                                                                                                                     gCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAAAACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAgg                >  6:61239/1‑149 (MQ=255)
                                                                                                                                      cTCGCGCTGGGCGGCCAGGCT‑GTTGAACTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCTATGTCGCGATAGTAGGCCAGGCACTCTTCTATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGc               <  7:179790/149‑1 (MQ=255)
                                                                                                                                         gcgctgggcgGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGccc             >  2:245112‑M2/11‑148 (MQ=255)
                                                                                                                                          cgctgggcgGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCa           <  1:406965‑M2/140‑1 (MQ=255)
                                                                                                                                           gctgggcgGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAg          >  5:260971‑M2/9‑149 (MQ=255)
                                                                                                                                           gctgggcgGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAg          >  5:266981‑M2/9‑149 (MQ=255)
                                                                                                                                               ggcgGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCt      >  6:225350‑M2/5‑149 (MQ=255)
                                                                                                                                                 cgGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCtt     >  4:354721‑M2/3‑148 (MQ=255)
                                                                                                                                                  gGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCTTGa   <  2:85708‑M2/148‑1 (MQ=255)
                                                                                                                                                  gGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCTTGa   <  3:354721‑M2/148‑1 (MQ=255)
                                                                                                                                                   gcCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCTTGAg  >  1:15874/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
TTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAGCTCGCGCTGGGCGGCCAGGCT‑GTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGTTTGAGCTCGCGGCTGATCGGCAGGCCCCAGGCCTTGAG  >  NC_002947/4860025‑4860320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.