New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5510220	76 (1.060)	4 (0.060)	4/258	NT	5.1%	coding (419/1488 nt)	urtB	urea ABC transporter permease
	?	NC_002947	= 5510250	77 (1.120)					coding (449/1488 nt)	urtB	urea ABC transporter permease

CAACAGCGAAACCCGCCTGGCCGCAGCCCAGCAACTACAGAAAAGCGCACAACCCGCGCAAATGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5510068‑5510220 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCCCAGCTGCAGGTTGGCCAGGGCCAGACCGAGGGCGGCCTGTACGGCGGCGTCCGGCTCGGCGGCGAAGCGCCGGTCGAGGAAGGCCATTTGCGCGGGTTGTGCGCTTTTCTGTA  <  NC_002947/5510250‑5510103                                                                                                                                                                                                                                                                                                               CAACAGCGAAACCCGCCTGGCCGCAGCCCAGCAACTACAGAAAAGCGCACAACCCGCGCAAATGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGG                                                                                                                                                          <  3:418039/149‑1   ACAGCGAAACCCGCCTGGCCGCAGCCCAGCAACTACAGAAAAGCGCACAACCCGCGCAATTGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGGGC                                                                                                                                                        <  3:141030/149‑1   ACAGCGAAACCCGCCTGGCCGCAGCCCAGCAACTACAGAAAAGCGCACAACCCGCGCAAATGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGGGC                                                                                                                                                        <  6:229234/149‑1    CAGCGAAACCCGCCTGGCCGCAGCCCAGCAACTACAGAAAAGCGCACAACCCGCGCAAATGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGGGCG                                                                                                                                                       >  1:389100/1‑149       CGAAACCCGCCTGGCCGCAGCCCAGCAACTACAGAAAAGCGCACAACCCGCGCAAATGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGGGCGC                                                                                                                                                      >  5:179094/1‑147                                         AAAAGCGCACAACCCGCGCAAATGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGGGCGCACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCC                                                                                                                   >  2:339241/1‑148                                           AAGCGCACAACCCGCGCAAATGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGGGCGCACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCCCAG                                                                                                                <  3:311264/149‑1                                            AGCGCACAACCCGCGCAAATGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGGGCGCACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCCCAGC                                                                                                               <  1:339241/149‑1                                               GCACAACCCGCGCAAATGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGGGCGCACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCCCAGCTGC                                                                                                            <  4:137267/149‑1                                                                                                                                                      GCGCACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCCCAGCTGCAGGTTGGCCAGGGCCAGACCGAGGGCGGCCTGTACGGCGGCGTCCGGCTCGGCGGCGAAGCGCCGGTCGAGGAAGGCCATTTGCGCGGGTTGTGCGCTTTTCT     <  7:202200/149‑1                                                                                                                                                        GCACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCCCAGCTGCAGGTTGGCCAGGGCCAGACCGAGGGCGGCCTGTACGGCGGCGTCCGGCTCGGCGGCGAAGCGCCGGTCGAGGAAGGCCATTTGCGCGGGTTGTGCGCTTTTCTGT   <  7:214615/149‑1                                                                                                                                                        GCACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCCCAGCTGCAGGTTGGCCAGGGCCAGACCGAGGGCGGCCTGTACGGCGGCGTCCGGCTCGGCGGCGAAGCGCCGGTCGAGGAAGGCCATTTGCGCGGGTTGTGCGCTTTTCTG    >  3:260029/1‑148                                                                                                                                                         CACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCCCAGCTGCAGGTTGGCCAGGGCCAGACCGAGGGCGGCCTGTACGGCGGCGTCCGGCTCGGCGGCGAAGCGCCGGTCGAGGAAGGCCATTTGCGCGGGTTGTGCGCTTTTCTGTA  <  4:7672/149‑1                                                                                                                                                         CACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCCCAGCTGCAGGTTGGCCAGGGCCAGACCGAGGGCGGCCTGTACGGCGGCGTCCGGCTCGGCGGCGAAGCGCCGGTCGAGGAAGGCCATTTGCGCGGGTTGTGCGCTTTTCTGTA  <  6:336485/149‑1                                                                                                                                                                                                                                                                                                               CAACAGCGAAACCCGCCTGGCCGCAGCCCAGCAACTACAGAAAAGCGCACAACCCGCGCAAATGGCCTTCCTCGACCGGCGCTTCGCCGCCGAGCCGGACGCCGCCGTACAGGCCGCCCTCGGTCTGGCCCTGGCCAACCTGCAGCTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5510068‑5510220 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcACGGCGGCCAGGCGTACCGCAGGCTCGCTGGCGCCCAGCTGCAGGTTGGCCAGGGCCAGACCGAGGGCGGCCTGTACGGCGGCGTCCGGCTCGGCGGCGAAGCGCCGGTCGAGGAAGGCCATTTGCGCGGGTTGTGCGCTTTTCTGTA  <  NC_002947/5510250‑5510103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.