| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5929521 = | 86 (1.200) | 4 (0.060) | 4/256 | NT | 5.3% | coding (867/1224 nt) | visC | ubiquinone biosynthesis oxidoreductase |
| ? | NC_002947 | 5929590 = | 61 (0.890) | coding (798/1224 nt) | visC | ubiquinone biosynthesis oxidoreductase | |||||
TGCCGAGCAGTTGATGGCGATGGATGAAGCGGCCTTCCTGCAGGCCCTGGAGCGGGCCTTCGAAGGGCGTCTGGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5929674‑5929521‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTCCTGCTGGCCATCGCGGGTCAACGG > NC_002947/5929590‑5929736 TGCCGAGCAGTTGATGGCGATGGATGAAGCGGCCTTCCTGCAGGCCCTGGAGCGGGCCTTCGAAGGGCGTCTGGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAG < 6:56066/149‑1TGCCGAGCAGTTGATGGCGATGGATGAAGCGGCCTTCCTGCAGGCCCTGGAGCGGGCCTTCGAAGGGCGTCTGGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAG < 8:382003/149‑1 CGAGCAGTTGATGGCGATGGATGAAGCGGCCTTCCTGCAGGCCCTGGAGCGGGCCTTCGAAGGGCGTCTGGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCC > 2:52156/1‑149 CTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACT > 3:109535/1‑149 CAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTGAAGCACCTCGCCCAGACGCCCTTCGGAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCT > 4:365490/1‑149 GTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTGAAGCACCTCGCCCAGACGCCCTTCGGAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGG < 3:365490/149‑1 AGCGACACGCCAAGCGCTACGTGGATGAAGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGA < 4:109535/149‑1 GGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTC > 1:382539/1‑129 GGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTC < 2:382539/129‑1 GCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTCCTGCTGGCCATCGCGGGTCAA > 5:374973/1‑149 CCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTCCTGCTGGCCATCGCGGGTCAAC < 5:56066/149‑1 CCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTCCTGCTGGCCATCGCGGGTCAAC < 7:410074/149‑1 TGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTCCTGCTGGCCATCGCGGGTCAACGG > 6:427274/1‑149 TGCCGAGCAGTTGATGGCGATGGATGAAGCGGCCTTCCTGCAGGCCCTGGAGCGGGCCTTCGAAGGGCGTCTGGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5929674‑5929521‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTCCTGCTGGCCATCGCGGGTCAACGG > NC_002947/5929590‑5929736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |