New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6117733	66 (0.920)	4 (0.060)	4/258	NT	6.0%	coding (42/471 nt)	PP_5367	transketolase domain‑containing protein
	?	NC_002947	= 6117802	62 (0.900)					intergenic (‑28/+68)	PP_5367/PP_5368	transketolase domain‑containing protein/MFS transporter

CTGCCGCAGCGATCGCTTGTTCGGACCCTACGAACAAATCCGCGCCGATCACACCGGCAATCGACAACATGGTCACATGTCGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6117584‑6117733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACCATAATGACTATGACGACGTCTGGGAAAGCCAGCGATCAGTTGGCTCAGGGATTCAAGCCTCGACATGTG  <  NC_002947/6117802‑6117657                                                                                                                                                                                                                                                                                                          CTGCCGCAGCGATCGCTTGTTCGGACCCTACGAACAAATCCGCGCCGATCACACCGGCAATCGACAACATGGTCACATGTCGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCT                                                                                                                                                     >  5:107290/1‑149    CCGCAGCGATCGCTTGTTCGGACCCTACGAACAAATCCGCGCCGATCACACCTGCAATCGACTACATGGTCTCATGTCGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTG                                                                                                                                                    <  2:220119/147‑1                                                       CGGCAATCGACAACATGGTCACATGTCGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACC                                                                                                >  6:141481/1‑148                                                                             ATGTCGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGA                                                                         <  5:141481/149‑1                                                                                 CGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACC                                                                       <  1:250163/147‑1                                                                                 CGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACC                                                                       >  2:250163/1‑147                                                                                                                                                  CCCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACCATAATGACTATGACGACGTCTGGGAAAGCCAGCGATCAGTTGGCTCAGGGATTCAAGCCTCGACATG    >  1:398470/1‑149                                                                                                                                                  CCCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGT                                                                                                                      <  1:398437/35‑1                                                                                                                                                  CCCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGT                                                                                                                      >  2:398437/1‑35                                                                                                                                                   CCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACCATAATGACTATGACGACGTCTGGGAAAGCCAGCGATCAGTTGGCTCAGGGATTCAAGCCTCGACATGT   >  2:152992/1‑149                                                                                                                                                   CCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACCATAATGACTATGACGACGTCTGGGAAAGCCAGCGATCAGTTGGCTCAGGGATTCAAGCCTCGACATGT   <  3:414578/149‑1                                                                                                                                                    CTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACCATAATGACTATGACGACGTCTGGGAAAGCCAGCGATCAGTTGGCTCAGGGATTCAAGCCTCGACATGTG  <  7:173482/149‑1                                                                                                                                                    CTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACCATAATGACTATGACGACGTCTGGGAAAGCCAGCGATCAGTTGGCTCAGGGATTCAAGCCTCGACATGT   >  1:153015/1‑148                                                                                                                                                                                                                                                                                                          CTGCCGCAGCGATCGCTTGTTCGGACCCTACGAACAAATCCGCGCCGATCACACCGGCAATCGACAACATGGTCACATGTCGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6117584‑6117733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACCATAATGACTATGACGACGTCTGGGAAAGCCAGCGATCAGTTGGCTCAGGGATTCAAGCCTCGACATGTG  <  NC_002947/6117802‑6117657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.