BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	328961 =	96 (1.340)	5 (0.070)	4/252	NT	5.6%	coding (289/1368 nt)	PP_0270	sensor histidine kinase
*	?	NC_002947	329005 =	77 (1.140)	5 (0.070)	4/252	NT	5.6%	coding (245/1368 nt)	PP_0270	sensor histidine kinase

Only 100 of 111 total aligned reads displayed.

GGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCG  >  NC_002947/328814‑329105

gcatctggttcgacgtgcgtttcgctcaggcgctagaggtgctcgtacgactggttgctgcacgcagcgcccccctgattgcccaggccgactgccacggcggtacgctgcaggcgccagcccactaccagcttcactgcgtcgaaagc                                                                                                                                                  <  5:423304‑M1/1‑1 (MQ=255)

gcatctggttcgacgtgcgtttcgctcaggcgctagaggtgcccgtacgactggttgctgcacgcagcgcccccctgattgcccaggccgactgccacggcggtacgctgcaggcgccagcccactaccagcttcactgcgtcgaaagc                                                                                                                                                  <  1:278876‑M1/1‑1 (MQ=255)

gcatctggttcgacgtgcgtttcgctcaggcgctagaggtgcccgtacgactggttgctgcacgcagcgcccccctgattgcccaggccgactgccacggcggtacgctgcaggcgccagcccactaccagcttcactgcgtcgaaagc                                                                                                                                                  <  6:407285‑M1/1‑1 (MQ=255)

 gATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTTAGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGAcc                                                                                                                                                 >  1:130462/1‑149 (MQ=255)

  atctggttcgacgtgcgtttcgctcaggcgctagaggtgcccgtacgactggttgctgcacgcagcgcccccctgattgcccaggccgactgccacggcggtactctgcaggcgccagcccactaccagcttcactgcgtcgaaagccc                                                                                                                                                >  4:155746‑M1/147‑149 (MQ=255)

       gttcgacgtgcgtttcgctcaggcgctagaggtgcccgtacgactggttgctgcacgcagcgcccccctgattgcccaggccgactgccacggcggtacgctgcaggcgccagcccactaccagcttcactgcgtcgaaagc                                                                                                                                                  <  4:92996‑M1/1‑1 (MQ=255)

       gttcgacgtgcgtttcgctcaggcgctagaggtgcccgtacgactggttgctgcacgcagcgcccccctgattgcccaggccgactgccacggcggtacgctgcaggcgccagcccactaccagcttcactgcgtcgaaagc                                                                                                                                                  >  3:92996‑M1/142‑142 (MQ=255)

        gcCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTAGACCCGCCtgtg                                                                                                                                         >  3:231576/1‑149 (MQ=255)

               ccGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCgcgg                                                                                                                                  >  5:407285/1‑149 (MQ=255)

                 gggcgcAGGCCGAACCGGCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑GCGGGGAGGTGCACGTGCAGCAGGCGTACGTCCTGGGCATGCCCCAGCGCGTCCTTCCGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCgcggcg                                                                                                                                <  7:336489/147‑1 (MQ=255)

                  tGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGgcgc                                                                                                                               <  3:22578/149‑1 (MQ=255)

                        ggCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCa                                                                                                                         >  2:408448/1‑149 (MQ=255)

                          ccGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATg                                                                                                                       <  1:402139/149‑1 (MQ=255)

                           cGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGc                                                                                                                      <  2:60635/149‑1 (MQ=255)

                              acgagCTGGGCCAGCCGATCGTCTGGCGCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGctct                                                                                                                   >  3:4628/5‑149 (MQ=255)

                                 ggCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTgc                                                                                                                <  3:319807/149‑1 (MQ=255)

                                  gCTGGGCCAGCCGATCGTCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTgcg                                                                                                               >  8:389444/1‑149 (MQ=255)

                                  gCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTgcg                                                                                                               >  6:211915/1‑149 (MQ=255)

                                  gCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTgcg                                                                                                               >  8:372317/1‑149 (MQ=255)

                                    tgggcCAGCCGATCGTCTGGCGCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTAGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTgcg                                                                                                               >  5:305641/4‑147 (MQ=255)

                                    tGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTgcg                                                                                                               >  5:63639/1‑147 (MQ=255)

                                        ccAGAGTATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGGATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGc                                                                                                                                        <  7:411184/118‑1 (MQ=255)

                                        ccAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCCCTCGTCATGCTCTTGCGCAGGCg                                                                                                         >  2:182894/1‑149 (MQ=255)

                                         cccgtacgactggttgctgcacgcagcgcccccctgattgcccaggccgactgccacggcggtacgctgcaggcgccagcccactaccagcttcactgcgtcgaaagCCCGC‑‑‑‑‑‑‑‑‑‑GGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGa                                                                                                >  8:165937‑M1/108‑148 (MQ=255)

                                          aGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCggg                                                                                                       >  7:231613/1‑149 (MQ=255)

                                           gACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGc                                                                                                      >  4:85119/1‑149 (MQ=255)

                                           cgtacgactggttgctgcacgcagcgcccccctgattgcccaggccgactgccacggcggtacgctgcaggcgccagcccactaccagcttcactgcgtcgaaagCCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCggg                                                                                                       >  5:297397‑M1/106‑149 (MQ=255)

                                            atacgactggttgctgcacgcagcgcccccctgattgcccaggccgactgccacggcggtacgctgcaggcgccagcccactaccagcatcactgcgtcgaaagCCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCggg                                                                                                       >  3:259391‑M1/105‑148 (MQ=255)

                                            aCGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCtt                                                                                                                  >  1:179148/1‑136 (MQ=255)

                                            aCGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCtt                                                                                                                  <  2:179148/136‑1 (MQ=255)

                                            aCGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCt                                                                                                     <  7:303087/149‑1 (MQ=255)

                                              gATCGTCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCttt                                                                                                   <  7:389444/149‑1 (MQ=255)

                                              gATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCttt                                                                                                   <  3:85119/149‑1 (MQ=255)

                                               aTCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTc                                                                                                  <  1:214616/149‑1 (MQ=255)

                                                tCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTc                                                                                                  >  8:405710/1‑148 (MQ=255)

                                                  ggCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGAc                                                                                               <  7:316899/149‑1 (MQ=255)

                                                  ggCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCAT‑AGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACg                                                                                              >  8:247655/1‑149 (MQ=255)

                                                   gCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACg                                                                                              >  6:20474/1‑149 (MQ=255)

                                                    cTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGc                                                                                             <  6:240237/149‑1 (MQ=255)

                                                       gCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAg                                                                                           <  5:211915/148‑1 (MQ=255)

                                                        cccAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTc                                                                                                  >  4:137790/1‑140 (MQ=255)

                                                        cccAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTc                                                                                                  <  3:137790/140‑1 (MQ=255)

                                                          cAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTg                                                                                         >  6:341421/1‑147 (MQ=255)

                                                              tcg‑tcgGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTg                                                                                   <  2:427159/149‑1 (MQ=255)

                                                                  tcgGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTa                                                                                <  8:360356/149‑1 (MQ=255)

                                                                   cgGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAg                                                                                           <  7:106076/137‑1 (MQ=255)

                                                                   cgGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAg                                                                                           >  8:106076/1‑137 (MQ=255)

                                                                    ggTGAGTTGCATGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACg                                                                                              >  6:60503/1‑133 (MQ=255)

                                                                      tGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTgg                                                                            <  5:341421/149‑1 (MQ=255)

                                                                          ttGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTg                                                                        >  5:443309/1‑149 (MQ=255)

                                                                          ttGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTg                                                                        <  7:372317/149‑1 (MQ=255)

                                                                          ttGCACGTGCATCAGGCGTACGTCCGGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTg                                                                        <  6:136291/149‑1 (MQ=255)

                                                                             cACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGgc                                                                      <  6:220177/148‑1 (MQ=255)

                                                                                gTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCt                                                                  >  4:103954/1‑149 (MQ=255)

                                                                                   cATCCGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACCGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCa                                                               <  4:52909/149‑1 (MQ=255)

                                                                                     tCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTgg                                                                                  <  5:6009/128‑1 (MQ=255)

                                                                                     tCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTgg                                                                                  >  6:6009/1‑128 (MQ=255)

                                                                                        ggCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTg                                                                                   <  2:417154/124‑1 (MQ=255)

                                                                                        ggCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTg                                                                                   >  1:417154/1‑124 (MQ=255)

                                                                                         gCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGt                                                           >  7:75921/1‑147 (MQ=255)

                                                                                         gCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGt                                                           <  8:75921/147‑1 (MQ=255)

                                                                                           gTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTAccg                                                       >  6:339241/1‑149 (MQ=255)

                                                                                            tACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTAccgc                                                      <  3:103954/149‑1 (MQ=255)

                                                                                              ccacggcggtacgctgcaggcgccagcccactaccagcttcactgcgtcgaaagCCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCgg                                                                                                        <  3:28442‑M1/43‑1 (MQ=255)

                                                                                               gTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGt                                                   <  8:231613/149‑1 (MQ=255)

                                                                                                 ccTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTgg                                                 <  1:401868/149‑1 (MQ=255)

                                                                                                 ccTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCGGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTgg                                                 >  8:314341/1‑149 (MQ=255)

                                                                                                  cTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTgg                                                 <  4:217297/148‑1 (MQ=255)

                                                                                                     ggCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCa                                               <  7:405710/147‑1 (MQ=255)

                                                                                                           ccccAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCt                                       <  6:207145/149‑1 (MQ=255)

                                                                                                            cccAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTg                                      >  4:233370/1‑149 (MQ=255)

                                                                                                            cccAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTg                                      >  6:423304/1‑149 (MQ=255)

                                                                                                              cAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTggg                                    >  5:155669/1‑149 (MQ=255)

                                                                                                              cAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGGCGGCCTggg                                    <  8:410320/149‑1 (MQ=255)

                                                                                                                 cTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCaa                                 <  6:305641/149‑1 (MQ=255)

                                                                                                                  tCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAAt                                >  7:195052/1‑149 (MQ=255)

                                                                                                                    gTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTgg                                                 <  4:369763/130‑1 (MQ=255)

                                                                                                                    gTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTgg                                                 <  4:363735/130‑1 (MQ=255)

                                                                                                                    gTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTgg                                                 >  3:369763/1‑130 (MQ=255)

                                                                                                                    gTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTgg                                                 >  3:363735/1‑130 (MQ=255)

                                                                                                                    gTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTggg                                    >  7:160598/1‑143 (MQ=255)

                                                                                                                    gTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTggg                                    <  8:160598/143‑1 (MQ=255)

                                                                                                                    gTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAAt                                >  2:278876/1‑147 (MQ=255)

                                                                                                                       cTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAgg                            <  6:443309/148‑1 (MQ=255)

                                                                                                                       cTTCAGGGCCTGCTGCAACAACAGCTCGACCCCCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAgg                            <  4:231576/148‑1 (MQ=255)

                                                                                                                          cAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAgggg                          <  5:20474/147‑1 (MQ=255)

                                                                                                                            gggCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATc                               <  3:88237/140‑1 (MQ=255)

                                                                                                                            gggCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATc                               >  4:88237/1‑140 (MQ=255)

                                                                                                                            gggCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGgcg                      >  1:163332/1‑149 (MQ=255)

                                                                                                                                ctgctgCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGc                  >  8:391517/1‑149 (MQ=255)

                                                                                                                                ctgctgCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGc                  <  1:408448/149‑1 (MQ=255)

                                                                                                                                     gcAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGgc                                                                      >  4:385541/1‑92 (MQ=255)

                                                                                                                                     gcAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGgc                                                                      <  3:385541/92‑1 (MQ=255)

                                                                                                                                      caacaaCAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTgc              <  5:339241/147‑1 (MQ=255)

                                                                                                                                       aacaacAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTgcag            >  6:274195/1‑148 (MQ=255)

                                                                                                                                         caacaGCTCGACGCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCaa         >  1:71035/1‑149 (MQ=255)

                                                                                                                                          aacaGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAAc        <  7:247655/149‑1 (MQ=255)

                                                                                                                                             aGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAg     >  8:223762/1‑149 (MQ=255)

                                                                                                                                                 cGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCg  >  8:136818/1‑148 (MQ=255)

                                                                                                                                                 cGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCg  >  8:89179/1‑148 (MQ=255)

GGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCG‑TCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCG  >  NC_002947/328814‑329105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.