New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 76935164 (0.890)5 (0.070) 4/252 NT 7.3% coding (1429/1440 nt) mmuP S‑methyl‑L‑methionine transporter
?NC_002947 = 769381 67 (1.000)intergenic (+19/‑27) mmuP/PP_0661 S‑methyl‑L‑methionine transporter/transcriptional regulator AmpR

CTGCGTCGGCATTGCCTTCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCACCCATGCGGCAGAAGAGCT  >  NC_002947/769203‑769499
                                                                                                                                                    |                                                                                                                                                     
cTGCGTCGGCATTGCCTTCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCG                                                                                                                                                       <  2:68870‑M1/149‑1 (MQ=255)
   cGTCGGCATTGCCTTCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAGGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGa                                                                                                                                                      <  8:140995/147‑1 (MQ=255)
    gTCGGCATTGCCTTCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGgtgg                                                                                                                                                   >  7:221677‑M1/1‑145 (MQ=255)
    gTCGGCATTGCCTTCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGgc                                                                                                                                                   >  8:313829/1‑149 (MQ=255)
     tCGGCATTGCCTTCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGgcc                                                                                                                                                  >  3:122316/1‑149 (MQ=255)
     tCGGCATTGCCTTCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGgcc                                                                                                                                                  <  7:116101/149‑1 (MQ=255)
        gCATTGCCTTCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGgccgcc                                                                                                                                               >  5:339603/1‑149 (MQ=255)
              ccTTCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCa                                                                                                                                         <  3:257725/149‑1 (MQ=255)
                ttCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGgtggcctagtatcacc                                                                                                                                       >  6:109226‑M1/1‑133 (MQ=255)
                ttCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATAGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCCAGTACCGCAGCCGCCGTACGGCCCCGCTGGACATCGTCGCCCCAGGTTCCCAGGCCGCCGGAGCCgg                                                                                                                                       >  2:188681/1‑149 (MQ=255)
                    aCCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGa                                                                                                                                    >  6:405542/1‑148 (MQ=255)
                    aCCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGACCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGa                                                                                                                                    >  2:104024/1‑148 (MQ=255)
                      ccAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATa                                                                                                                                  >  3:307423/1‑148 (MQ=255)
                      ccAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATAc                                                                                                                                 >  7:13713/1‑149 (MQ=255)
                        aGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTACATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGCGGCCGCCTGAGCAGGTGATAc                                                                                                                                 >  1:283701/1‑147 (MQ=255)
                         gCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAg                                                                                                                              <  8:388979/149‑1 (MQ=255)
                             aGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAg                                                                                                                              >  3:81915/1‑145 (MQ=255)
                             aGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAg                                                                                                                              <  4:81915/145‑1 (MQ=255)
                              gggggTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACTTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCGAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCAc                                                                                                                         <  7:289217/147‑1 (MQ=255)
                               cGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACc                                                                                                                        >  1:194562‑M2/1‑148 (MQ=255)
                                   ttGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACcggac                                                                                                                    <  1:177772‑M2/149‑6 (MQ=255)
                                   ttGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACcggaa                                                                                                                    >  5:405542‑M2/1‑144 (MQ=255)
                                      cccTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACcggaacc                                                                                                                  <  5:61456‑M2/148‑8 (MQ=255)
                                      cccTGTACTTCGGCTTGCCCTTCATTGACTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCAAGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTTAGCAGGTCATACTAGGCCACcggaacc                                                                                                                  <  4:328470‑M2/148‑8 (MQ=255)
                                       ccTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGgtggcctagtatcacctgctcaggcggcctcggaacctg                                                                                                                <  8:221677‑M1/149‑40 (MQ=255)
                                       ccTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACcggaacc                                                                                                                  <  6:221756‑M2/147‑8 (MQ=255)
                                        cTGTTCTTCCGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGGCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAg                                                                                                               <  8:381428/149‑1 (MQ=255)
                                         tGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGc                                                                                                              >  2:290598/1‑149 (MQ=255)
                                         tGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGc                                                                                                              >  6:149341/1‑149 (MQ=255)
                                          gTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGc                                                                                                              >  5:270538/1‑148 (MQ=255)
                                          gTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGc                                                                                                              >  6:163848/1‑148 (MQ=255)
                                           tACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGgtggcctagtatcacctgctcaggcggcctcggaacctggg                                                                                                              <  5:109226‑M1/147‑42 (MQ=255)
                                           tACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGc                                                                                                              <  5:103496/147‑1 (MQ=255)
                                           tACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCa                                                                                                            <  6:339603/149‑1 (MQ=255)
                                             cTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACg                                                                                                          >  8:181316/1‑149 (MQ=255)
                                             cTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCAAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCAc                                                                                                           <  7:400185/148‑1 (MQ=255)
                                              ttCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCAc                                                                                                           >  3:348508/1‑147 (MQ=255)
                                                cGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACga                                                                                                         <  4:372262/147‑1 (MQ=255)
                                                          ttCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGgtggcctagtatcacctgctcaggcggcctcggaacctggg                                                                                                              <  4:312065‑M1/132‑42 (MQ=255)
                                                          ttCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGgtggcctagtatcacctgctcaggcggcctcggaacctggg                                                                                                              >  3:312065‑M1/1‑91 (MQ=255)
                                                             aTTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAg                                                                                                                                        >  6:45590/1‑103 (MQ=255)
                                                             aTTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAg                                                                                                                                        <  5:45590/103‑1 (MQ=255)
                                                              ttGCCTTGTGATACCTGGCCTATTGGCTGACTTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGATCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGAcc                                                                                         <  3:73939/149‑1 (MQ=255)
                                                               tGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGTCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACcgga                                                                                                                     >  6:33511‑M2/1‑116 (MQ=255)
                                                               tGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGCCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACcgga                                                                                                                     <  5:33511‑M2/120‑5 (MQ=255)
                                                                 cgtGGTGCTACCTGGACTATTGGCTGACGTGCAAGTACCGCTTCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCa                                                                                       <  4:295327/146‑1 (MQ=255)
                                                                 ccTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGAcc                                                                                         >  6:439429/1‑146 (MQ=255)
                                                                  cTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAg                                                                                      >  5:392884/1‑148 (MQ=255)
                                                                      tGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAAc                                                                                 <  8:48863/149‑1 (MQ=255)
                                                                         tcccTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCtt                                                                              >  2:8914/3‑149 (MQ=255)
                                                                           ccTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTg                                                                             <  6:61456/148‑1 (MQ=255)
                                                                           ccTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTg                                                                             <  4:122316/148‑1 (MQ=255)
                                                                           ccTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGc                                                                            >  2:275976/1‑149 (MQ=255)
                                                                               gCCTATTGCCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATAATAGGCCACCGGAACCTACACACGAGAAGCCGCCGATGACACAGAAAACCTTGccccc                                                                        >  8:76161/1‑149 (MQ=255)
                                                                                 cTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGccccccc                                                                     >  7:109393/1‑149 (MQ=255)
                                                                                  tATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCt                                                                    >  5:444165/1‑149 (MQ=255)
                                                                                  tATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCt                                                                    >  8:311615/1‑149 (MQ=255)
                                                                                    ttGGCTGACGTGCAAGTACCGCAGCCGCCGTACGACCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTg                                                                   <  1:104024/148‑1 (MQ=255)
                                                                                       gCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAAGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGACCCCCCTGAACt                                                               >  8:345341/1‑149 (MQ=255)
                                                                                             gTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTga                                                         <  8:13713/149‑1 (MQ=255)
                                                                                              tGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCAGACGATGAACCAGAAAACATTGCCCCCCCTGAACTGTCt                                                           >  6:281156/1‑146 (MQ=255)
                                                                                                cAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTgaga                                                       <  6:270538/148‑1 (MQ=255)
                                                                                                cAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGagag                                                      >  6:199363/1‑149 (MQ=255)
                                                                                                 aaGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACAGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTTCCCCCCCTGAACTGGCTGagag                                                      >  2:21744/1‑148 (MQ=255)
                                                                                                      ccGCAGCCTCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTc                                                 <  4:348508/148‑1 (MQ=255)
                                                                                                        gCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGCGCCTTCGaa                                              <  2:177772/149‑1 (MQ=255)
                                                                                                         cAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCAACCGGAACATAGCCACGAGAACCCGCCGATGCCCCAGAAAACCTTACCCCCCCTGAACTGGCTGAGAGCCTTCGAAg                                             >  8:41798/1‑149 (MQ=255)
                                                                                                          aGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAgt                                            <  5:221756/149‑1 (MQ=255)
                                                                                                               ccgTACGGCCCCGCTGGAAATCGTCGCCCCTGGTTCCGAGGCCGCGTGAGCAGGTGATACTAGGCCACCGGATCCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGTAGTGTCgg                                       <  7:76161/149‑1 (MQ=255)
                                                                                                                 gTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGgcg                                     <  6:392884/149‑1 (MQ=255)
                                                                                                                  tACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGgctc                                    >  5:377893/1‑147 (MQ=255)
                                                                                                                     ggCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCGCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGt                                  <  1:290598/149‑1 (MQ=255)
                                                                                                                          cGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTg                            <  2:397796/149‑1 (MQ=255)
                                                                                                                               gAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAAc                         <  8:109393/147‑1 (MQ=255)
                                                                                                                                 aaTCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTAGTTGAACTTCa                     >  3:198689/1‑149 (MQ=255)
                                                                                                                                 aaTCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCa                     >  3:54576/1‑149 (MQ=255)
                                                                                                                                  aTCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCAc                    <  7:2337/149‑1 (MQ=255)
                                                                                                                                     gtcgCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCGGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCAccc                  <  2:283701/148‑1 (MQ=255)
                                                                                                                                      tcgCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACATGAACTTAACCCAt                >  2:362016/1‑149 (MQ=255)
                                                                                                                                        gCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCACCCATg               <  5:439429/148‑1 (MQ=255)
                                                                                                                                         ccccAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAAGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCACCCATGCg             <  7:345341/149‑1 (MQ=255)
                                                                                                                                          cccAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACcggaacctggggcgacgatttccagcggggccgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggcaatgaagggcaagccgaagta               <  5:109226‑M2/147‑107 (MQ=255)
                                                                                                                                          cccAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACcggaacctggggcgacgatttccagcggggccgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggcaatgaa                              >  3:312065‑M2/1‑41 (MQ=255)
                                                                                                                                          cccAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACcggaacctggggcgacgatttccagcggggccgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggcaatgaa                              <  4:312065‑M2/132‑92 (MQ=255)
                                                                                                                                           ccAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCACCCATGCgg            >  3:147914/1‑148 (MQ=255)
                                                                                                                                            cAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACcggaacctggggcgacgatttccagcggggccgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggcaatgaagggcaagccgaagtacagg           <  8:221677‑M2/149‑111 (MQ=255)
                                                                                                                                             aGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCACCCATGCGGCag         <  5:199363/149‑1 (MQ=255)
                                                                                                                                              ggTTCCGgtggcctagtatgacctgctaaggcggcctcggaacctggggcgacgatttccagcttggccgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccagtcaatgaagggcaagccgaagtacaggg          <  4:328470‑M1/148‑142 (MQ=255)
                                                                                                                                              ggTTCCGgtggcctagtatcacctgctcaggcggcctcggaacctggggcgacgatttccagcggggccgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggcaatgaagggcaagccgaagtacaggg          <  5:61456‑M1/148‑142 (MQ=255)
                                                                                                                                              ggTTCCGgtggcctagtatcacctgctcaggcggcctcggaacctggggcgacgatttccagcggggccgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggcaatgaagggcaagccgaagtacagg           <  6:221756‑M1/147‑141 (MQ=255)
                                                                                                                                                ttCCGgtggcctagtatcacctgctcaggcggcctcggaacctggggcgacgatttccagcggggccgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggcaatgaagggcaagccgaagtacagggcaa       >  5:405542‑M1/1‑5 (MQ=255)
                                                                                                                                                ttCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCACCCATGCGGCagaag      <  3:328470/149‑1 (MQ=255)
                                                                                                                                                gtcCGgtggcctagtatcacctgctcaggcggcctcggaacctggggcgacgatttccagcggggccgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggcaatgaagggcaagccgaagtacagggcaa       <  1:177772‑M1/148‑145 (MQ=255)
                                                                                                                                                 tCCGgtggcctagtatcacctgctcaggcggcctcggaacctggggcgacgatttccagcgggggcgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggca                                   <  5:33511‑M1/120‑117 (MQ=255)
                                                                                                                                                 tCCGgtggcctagtatcacctgctcaggcggcctcggaacctggggcgacgatttccagcggggacgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggca                                   >  6:33511‑M1/1‑4 (MQ=255)
                                                                                                                                                   cGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCACCCATGCGGCAGAAGAGc   >  3:212839/1‑149 (MQ=255)
                                                                                                                                                    ggtggcctagtatcacctgctcaggcggcctcggaacctggggcgacgatttccagcggggccgtacggcggctgcggtacttgcacgtcagccaataggccaggtagcaccaggcaatgaagggcaagccgaagtacagggcaacccg   >  1:194562‑M1/1‑1 (MQ=255)
                                                                                                                                                    gAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCACCCATGCGGCAGAAGAGCt  <  5:312970/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CTGCGTCGGCATTGCCTTCGACCCAGCTCAGCGGGTTGCCCTGTACTTCGGCTTGCCCTTCATTGCCTGGTGCTACCTGGCCTATTGGCTGACGTGCAAGTACCGCAGCCGCCGTACGGCCCCGCTGGAAATCGTCGCCCCAGGTTCCGAGGCCGCCTGAGCAGGTGATACTAGGCCACCGGAACCTAGCCACGAGAAGCCGCCGATGACCCAGAAAACCTTGCCCCCCCTGAACTGGCTGAGAGCCTTCGAAGTGTCGGCGCGTTACTTGAACTTCACCCATGCGGCAGAAGAGCT  >  NC_002947/769203‑769499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.