New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1942150	65 (0.910)	4 (0.060)	3/254	NT	5.9%	coding (692/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX
	?	NC_002947	= 1942176	67 (0.990)					coding (718/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX

CCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTGGGTCGCCAAGCACCCTGA  >  NC_002947/1942004‑1942294                                                                                                                                                   |                                                                                                                                                  ccGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGCACAGCATCGGCAGCAAGCAACTgg                                                                                                                                                 >  8:260760/1‑149 (MQ=255) ccGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGTCAGCAAGGAACTgg                                                                                                                                                 >  8:213238/1‑149 (MQ=255) ccGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTgg                                                                                                                                                 <  6:345550/149‑1 (MQ=255)    tGCCTATACCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGcca                                                                                                                                              <  3:33785/149‑1 (MQ=255)          tGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAgg                                                                                                                                        >  6:110088/1‑149 (MQ=255)           gCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAgg                                                                                                                                        >  8:267260/1‑148 (MQ=255)             cAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCAc                                                                                                                                     <  1:277432/149‑1 (MQ=255)             cAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCAc                                                                                                                                     >  8:3458/1‑149 (MQ=255)                    cagTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGt                                                                                                                              >  8:69254/1‑149 (MQ=255)                     agTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑g                                                                                                                            <  6:172143/149‑1 (MQ=255)                     agTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑g                                                                                                                            <  3:107663/149‑1 (MQ=255)                       tCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGc                                                                                                                          <  5:147542/149‑1 (MQ=255)                             gCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCTTCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGagtt                                                                                                                    <  5:141716‑M2/149‑5 (MQ=255)                              cGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGagttc                                                                                                                   <  7:393571‑M2/149‑6 (MQ=255)                              cGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGagttc                                                                                                                   >  6:206172‑M2/1‑144 (MQ=255)                                gTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGagttcct                                                                                                                 >  7:81468‑M2/1‑142 (MQ=255)                                  gACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTg                                                                                                                >  5:148434/1‑148 (MQ=255)                                   aCCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTccgccacttccggtgccttggtggccagttccttg                                                                                                                <  8:255720‑M1/148‑36 (MQ=255)                                   aCCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTga                                                                                                               <  2:71519/148‑1 (MQ=255)                                   aCCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTga                                                                                                               <  8:45472/148‑1 (MQ=255)                                    ccGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTccgccacttccggtgccttggtggccagttccttgct                                                                                                              <  5:438394‑M1/149‑38 (MQ=255)                                      ggCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTgaagaa                                                                                                           <  6:435004/149‑1 (MQ=255)                                           ggTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTTAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTc                                                                                                       <  7:65804/148‑1 (MQ=255)                                            gTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAACCCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACGGGAAGT‑GGCGGAGTTCCTGAAGAAGtgaaa                                                                                                     >  8:365622/1‑145 (MQ=255)                                            gTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGACACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCaa                                                                                                     >  1:41906/1‑149 (MQ=255)                                                  cACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGAAAGGAACTGGCCACCCAGCCACCGGAAGT‑GGCGGGGTGCCTGACGAAGTGCacatgc                                                                                                 >  6:57232/1‑142 (MQ=255)                                                       gATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTCGGCGGAGTTCCTGAAGAAGTTCAACTgg                                                                                                 <  1:246804/143‑1 (MQ=255)                                                       gATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTgg                                                                                                 >  2:246804/1‑142 (MQ=255)                                                            tCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACAGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCaa                                                                                                     >  3:391109/1‑133 (MQ=255)                                                            tCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACAGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCaa                                                                                                     <  4:391109/133‑1 (MQ=255)                                                              gCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACg                                                                                    <  6:148434/148‑1 (MQ=255)                                                               ccAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTccgccacttccggtgccttggtggccagttccttgct                                                                                                              >  7:256357‑M1/1‑85 (MQ=255)                                                               ccAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTccgccacttccggtgccttggtggccagttccttgct                                                                                                              <  8:256357‑M1/122‑38 (MQ=255)                                                               ccAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGtt                                                                                                        >  2:155724/1‑127 (MQ=255)                                                               ccAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGtt                                                                                                        <  1:155724/127‑1 (MQ=255)                                                                cAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACgaga                                                                                 <  5:110088/149‑1 (MQ=255)                                                                    tGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTgg                                                                             >  8:264943/1‑149 (MQ=255)                                                                       aaGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGa                                                                          <  6:141716/149‑1 (MQ=255)                                                                           tGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTgg                                                                                                 >  2:92728/1‑122 (MQ=255)                                                                           tGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTgg                                                                                                 <  1:92728/122‑1 (MQ=255)                                                                           tGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGt                                                                       >  2:359216/1‑148 (MQ=255)                                                                            gAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGa                                                                     >  4:68193/1‑149 (MQ=255)                                                                            gAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGa                                                                     >  7:60457/1‑149 (MQ=255)                                                                               gTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGc                                                                  >  3:69678/1‑149 (MQ=255)                                                                                ttCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCa                                                                                               <  1:170116/119‑1 (MQ=255)                                                                                ttCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCa                                                                                               >  2:170116/1‑119 (MQ=255)                                                                                  ccTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTgg                                                               >  3:80987/1‑149 (MQ=255)                                                                                   cTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGc                                                              >  6:312811/1‑149 (MQ=255)                                                                                      gAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGAt                                                           <  3:68193/149‑1 (MQ=255)                                                                                            ccGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGc                                                                            <  4:352676/126‑1 (MQ=255)                                                                                            ccGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGc                                                                            >  3:352676/1‑126 (MQ=255)                                                                                            ccGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGACCCAgtc                                                     >  2:311112/1‑147 (MQ=255)                                                                                             cGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCaag                                                      >  7:267769/1‑145 (MQ=255)                                                                                              gAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAg                                                   >  8:189989/1‑149 (MQ=255)                                                                                              gAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAg                                                   <  7:260760/149‑1 (MQ=255)                                                                                                aaGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAggg                                                 <  7:69254/149‑1 (MQ=255)                                                                                                 aGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAgggg                                                <  2:406305/149‑1 (MQ=255)                                                                                                   gCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGc                                               >  4:121675/1‑148 (MQ=255)                                                                                                          tGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCCAGCCt                                        >  1:437648/1‑148 (MQ=255)                                                                                                           ggCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTg                                       >  7:162143/1‑148 (MQ=255)                                                                                                            gcgcGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGaa                                     <  4:69678/149‑1 (MQ=255)                                                                                                            gcgcGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGa                                      <  7:213238/148‑1 (MQ=255)                                                                                                                   aGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCTCCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGgccg                              >  1:308846/1‑149 (MQ=255)                                                                                                                          gTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGa                       <  8:60457/149‑1 (MQ=255)                                                                                                                              aCAGCATCGGCAGCAAGGAACTGGCCACCAAGCCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTgg                   <  6:442190/149‑1 (MQ=255)                                                                                                                              aCAGCATCGGCAGCAAGGAACTGGCCACAAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTgg                   <  6:110426/149‑1 (MQ=255)                                                                                                                                 gCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCaa                          <  8:8436/139‑1 (MQ=255)                                                                                                                                 gCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCaa                          >  7:8436/1‑139 (MQ=255)                                                                                                                                  cATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTGGGTCg               >  6:108430/1‑149 (MQ=255)                                                                                                                                   aTCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTg                    <  6:220683/143‑1 (MQ=255)                                                                                                                                   aTCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTg                    >  5:220683/1‑143 (MQ=255)                                                                                                                                    tCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTGGGTCGcc             <  2:308846/149‑1 (MQ=255)                                                                                                                                         agcaAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGagttccttgctgccgatgctgttcacggtttctgccgcgccatatacgcctttcgggtcttcgaggaacttcagcttccacttggcgaacatccagtgcggaacccagccgg        <  5:438394‑M2/149‑113 (MQ=255)                                                                                                                                         agcaAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGagttccttgctgccgatgctgttcacggtttctgccgcgccatatacgcctttcgggtcttcgaggaacttcagcttccacttgg                                   <  8:256357‑M2/122‑86 (MQ=255)                                                                                                                                         agcaAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGagttccttgctgccgatgctgttcacggtttctgccgcgccatatacgcctttcgggtcttcgaggaacttcagcttccacttgg                                   >  7:256357‑M2/1‑37 (MQ=255)                                                                                                                                          gcaAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGTGCCAAGCCTTAAGCGGCCGCCAAGGACTGGGTCg               <  8:175480/141‑1 (MQ=255)                                                                                                                                          gcaAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTGGGTCg               >  7:175480/1‑141 (MQ=255)                                                                                                                                           caAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGagttccttgctgccgatgctgttcacggtttctgccgcgccatatacgcctttcgggtcttcgaggaacttcagcttccacttggcgaacatccagtgcggaacccagccggt       <  8:255720‑M2/148‑114 (MQ=255)                                                                                                                                           caAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTGGGTCGCCAAGCAcc      <  7:267260/149‑1 (MQ=255)                                                                                                                                            aaGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAACTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCAGGCGATCCACGAAGGGGCCAACCCTGAAGCGGCCGCCAAGCACTCGGTCGCCAAGCAcc      >  1:174253/1‑148 (MQ=255)                                                                                                                                             aGGAACTccgccacttccggtgccttggtggccagttccttgctgccgatgctgttcacggtttctgccgcgccatatacgcctttcgggtcttcgaggaacttcagcttccacttggcgaacatccagtgcggaacccagccggtcac     >  7:81468‑M1/1‑7 (MQ=255)                                                                                                                                              ggAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTGGGTCGCCAAGCACCCt    >  2:65401/1‑148 (MQ=255)                                                                                                                                               gAACTccgccacttccggtgccttggtggccagttccttgctgccgatgctgttcacggtttctgccgcgccatatacgcctttcgggtcttcgaggaacttcagcttccacttggcgaacatccagtgcggaacccagccggtcaccg   >  6:206172‑M1/1‑5 (MQ=255)                                                                                                                                               gAACTccgccacttccggtgccttggtggccagttccttgctgccgatgctgttcacggtttctgccgcgccatatacgcctttcgggtcttcgaggaacttcagcttccacttggcgaacatccagtgcggaacccagccggtcaccg   <  7:393571‑M1/149‑145 (MQ=255)                                                                                                                                                aaCTccgccacttccggtgccttggtggccagttccttgctgccgaagctgttcacggtttctgccgcgccatatacgcctttcgggtcttcgaggaacttcagcttccacttggcgaacatccagtgcggaacccagccggtcaccgc  <  5:141716‑M1/149‑146 (MQ=255)                                                                                                                                                   |                                                                                                                                                  CCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGT‑GGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGGGCCAAGCCTGAAGCGGCCGCCAAGGACTGGGTCGCCAAGCACCCTGA  >  NC_002947/1942004‑1942294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.