New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3606473 =	64 (0.890)	4 (0.060)	4/258	NT	6.2%	coding (289/951 nt)	PP_3181	site‑specific recombinase
	?	NC_002947	3606514 =	60 (0.870)					coding (248/951 nt)	PP_3181	site‑specific recombinase

AACCCAGCAACAGCAAGGCGCTGTCACGGCGAGCCCGGCGCAGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTACTGACTGCATGCTGGTCGGCGTG  >  NC_002947/3606326‑3606617                                                                                                                                                    |                                                                                                                                                  tctcccggccaccgccgagagtatcgcccgctacctggccgatcacgccgaccagcatgcagtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtG‑c                                                                                                                                                 <  8:334223‑M1/2‑1 (MQ=255) cggcccggccaccgccgagagtatcgcccgctacctggccgatcacgccgaccagcatgcagtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtG‑c                                                                                                                                                 >  2:163861‑M1/148‑149 (MQ=255)    cccggccaccgccgagagtatcgcccgctacctggccgatcacgccgaccagcatgcagtcagtaccctgcgccaacgcctggccacgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtG‑CGt                                                                                                                                               <  4:108579‑M1/4‑1 (MQ=255)    ccAGCAACAGCAAGGCGCTGTCACGGCGAGCCCGGCGCAGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTc                                                                                                                                              >  3:242481/1‑149 (MQ=255)     ccggccaccgccgagagtatcgcccgctacctggccgatcacgccgaccagcatgcagtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccacggcgccattggtG‑CGt                                                                                                                                               <  6:369008‑M1/4‑1 (MQ=255)     ccggccaccgccgagagtatcgcccgctacctggccgatcacgccgaccagcatgcagtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtggcgtc                                                                                                                                              <  7:126591‑M1/6‑6 (MQ=255)     cagcaacagcaaGGCGCTGTCACGGCGAGCCCGGCGCAGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCg                                                                                                                                             >  4:3924/1‑149 (MQ=255)      cggccaccgccgagagtatcgcccgctacctggccgatcacgccgaccagcatgcagtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtG‑CGTCgg                                                                                                                                            <  4:371701‑M1/7‑1 (MQ=255)      agcaacagcaaGGCGCTGTCACGGCGAGCCCGGCGCAGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCgg                                                                                                                                            <  2:393404/149‑1 (MQ=255)                  gcgcTGTCACGGCGAGCCCGGCGCAGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCg                                                                                                                                >  3:148722/1‑149 (MQ=255)                      tGTCACGGCGAGCCCGGCGCAGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATg                                                                                                                            >  1:187056/1‑149 (MQ=255)                           cGGCGAGCCCGGCGCAGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCcgcg                                                                                                                       >  7:183534/1‑149 (MQ=255)                           cGGCGAGCCCGGCGCAGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCcgcg                                                                                                                       <  3:193953/149‑1 (MQ=255)                             gCGAGCCCGGCGCAGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTa                                                                                                                     <  5:387753/149‑1 (MQ=255)                                         gatcacgccgaccagcatgcagtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCa                                                                                                         >  3:371701‑M1/108‑149 (MQ=255)                                          aGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCAc                                                                                                        <  2:386135/149‑1 (MQ=255)                                           tcacgccgaccagcatgcagtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtGGCGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCAc                                                                                                        >  8:126591‑M1/106‑149 (MQ=255)                                            ggCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCAcc                                                                                                       >  1:174703/1‑148 (MQ=255)                                              cgccgaccagcatgcagtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGc                                                                                                          >  2:57921‑M1/103‑143 (MQ=255)                                              cgccgaccagcatgcagtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGc                                                                                                          <  1:57921‑M1/41‑1 (MQ=255)                                                  cAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCg                                                                                                                                <  5:77720/117‑1 (MQ=255)                                                  cAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCg                                                                                                                                >  6:77720/1‑117 (MQ=255)                                                  cAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGgcg                                                                                                >  5:369008/1‑149 (MQ=255)                                                  cAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGgcg                                                                                                >  8:216761/1‑149 (MQ=255)                                                         tGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCTGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGt                                                                                         >  3:310238/1‑149 (MQ=255)                                                           gTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTc                                                                                        <  4:148722/148‑1 (MQ=255)                                                              gtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtG‑CGTc                                                                                                                                              >  4:310809‑M1/87‑91 (MQ=255)                                                              gtcagtaccctgcgccaacgcctggccgcgctcagccagtggcacgtcgcccaaggcttccccgatccgaccaaggcgccattggtG‑CGTc                                                                                                                                              <  3:310809‑M1/5‑1 (MQ=255)                                                                 gcgGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGt                                                                                                                                   <  4:179862/99‑1 (MQ=255)                                                                   gggCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCggg                                                                                >  6:377485/1‑148 (MQ=255)                                                                    ggCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTTCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGT‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGa                                                                              <  4:330840/149‑1 (MQ=255)                                                                    ggCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGa                                                                              <  2:390535/149‑1 (MQ=255)                                                                       ttGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGAACCTGACGCACCAATGGGGCCTTGGTCGGATCGGGGAAGc                                                                           >  5:358704/1‑149 (MQ=255)                                                                         gTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCAc                                                                                                        <  3:94874/118‑1 (MQ=255)                                                                         gTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCAc                                                                                                        >  4:94874/1‑118 (MQ=255)                                                                         gTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCt                                                                         >  2:179835/1‑149 (MQ=255)                                                                             ggCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCATTGGTCGGATCGGGGAAGCCTTggg                                                                     >  4:15324/1‑149 (MQ=255)                                                                              gCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGc                                                                    >  2:180592/1‑149 (MQ=255)                                                                                  cttcttcGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGAc                                                                 <  8:183534/148‑1 (MQ=255)                                                                                      ttcGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGc                                                             >  4:87783/1‑148 (MQ=255)                                                                                      ttcGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGc                                                             >  8:3055/1‑148 (MQ=255)                                                                                       tcGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCa                                                           >  5:183988/1‑149 (MQ=255)                                                                                        cGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACATGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCAc                                                          >  3:226294/1‑149 (MQ=255)                                                                                        cGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGACCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCAc                                                          >  3:412648/1‑149 (MQ=255)                                                                                         gAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACt                                                         <  3:3924/149‑1 (MQ=255)                                                                                           aaCACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTgg                                                       <  1:179835/149‑1 (MQ=255)                                                                                                gTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAg                                                  >  2:207908/1‑149 (MQ=255)                                                                                                gTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAg                                                  >  2:69025/1‑149 (MQ=255)                                                                                                 tCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAgc                                                 >  3:108579/1‑149 (MQ=255)                                                                                                 tCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCGTGGTCGGAACGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAgc                                                 >  2:148531/1‑149 (MQ=255)                                                                                                     aGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAgc                                                 <  5:424753/145‑1 (MQ=255)                                                                                                     aGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAgc                                                 >  6:424753/1‑145 (MQ=255)                                                                                                     aGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCgg                                             >  5:61713/1‑149 (MQ=255)                                                                                                         gTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAg                                         >  7:334223/1‑149 (MQ=255)                                                                                                             gCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGt                                     >  2:106074/1‑149 (MQ=255)                                                                                                              cAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGtt                                    <  1:207908/149‑1 (MQ=255)                                                                                                               aGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTg                                   <  6:183988/149‑1 (MQ=255)                                                                                                                       cagcaACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTg                                   >  2:386319/1‑141 (MQ=255)                                                                                                                       cagcaACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTg                                   <  1:386319/141‑1 (MQ=255)                                                                                                                       cagcaACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAggg                           >  2:416419/1‑149 (MQ=255)                                                                                                                        agcaACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAggg                           <  4:1976/148‑1 (MQ=255)                                                                                                                          caACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTac                        >  7:231445/1‑149 (MQ=255)                                                                                                                             cAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTactga                     <  2:187056/149‑1 (MQ=255)                                                                                                                             cAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTactga                     >  5:273406/1‑149 (MQ=255)                                                                                                                              aGCGGGGCGGCCTGTTTGGGTGA‑CGTCGGGTGCAGGGTGCGGATGCGGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGc                                                      >  7:345263/1‑115 (MQ=255)                                                                                                                              aGCGGGGCGGCCTGTTTGGGTGA‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGc                                                      <  8:345263/115‑1 (MQ=255)                                                                                                                               gCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTactgact                   <  5:377485/149‑1 (MQ=255)                                                                                                                                 ggggCGACCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTACTGACTGc                 <  4:412648/149‑1 (MQ=255)                                                                                                                                   ggcggcCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTACTGACTGCAt               <  3:15324/149‑1 (MQ=255)                                                                                                                                    gcggcCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTACTGACTGCATg              <  1:416419/149‑1 (MQ=255)                                                                                                                                       gcCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAg                                         >  6:52516/1‑119 (MQ=255)                                                                                                                                       gcCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAg                                         <  5:52516/119‑1 (MQ=255)                                                                                                                                       gcCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTACTGACTGCATGCTg           <  1:106074/149‑1 (MQ=255)                                                                                                                                       gcCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTACTGACTGCATGCTg           >  6:396479/1‑149 (MQ=255)                                                                                                                                         cTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTACTGACTGCATGCTGGt         >  1:77657/1‑149 (MQ=255)                                                                                                                                         cTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCGTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGGACTGACAGCATGCTGGt         >  6:147558/1‑149 (MQ=255)                                                                                                                                         cTGTTTGGGTGG‑CGTCGGGTACAGGGTGCGGATGCCGCGTAGCACCTGACCCACCAATGGCGCCTTGGTAGGATAGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCCCGGCCAGGCGTTGGCGCAGGGTACTGACTGCATGCTGGt         >  6:425048/1‑149 (MQ=255)                                                                                                                                                ggTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTACTGACTGCATGCTGGTCGGCGTg  <  5:396479/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  AACCCAGCAACAGCAAGGCGCTGTCACGGCGAGCCCGGCGCAGGGCTGCCAAATCATGGTGCTCGCGGGCTTGTCGGGCTTCTTCTTCGAAACACGTCACAGCGGTTTGCAGGTGTTGCAGCAACAGCGGGGCGGCCTGTTTGGGTGG‑CGTCGGGTGCAGGGTGCGGATGCCGCGTAGCACCTGACGCACCAATGGCGCCTTGGTCGGATCGGGGAAGCCTTGGGCGACGTGCCACTGGCTGAGCGCGGCCAGGCGTTGGCGCAGGGTACTGACTGCATGCTGGTCGGCGTG  >  NC_002947/3606326‑3606617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.