New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4443473 =	56 (0.780)	4 (0.060)	4/258	NT	6.4%	coding (509/1314 nt)	nicT	metabolite transport protein NicT
	?	NC_002947	4443511 =	64 (0.930)					coding (471/1314 nt)	nicT	metabolite transport protein NicT

CAGCCACTTGGCCTGCTGGAAATGGTTAGGCAATGCCCAGAACGTGAGGATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGGCCGCCCCCAGCAGGAAACGCA  >  NC_002947/4443325‑4443620                                                                                                                                                     |                                                                                                                                                    cAGCCACTTGGCCTGCTGGAAATGGTTAGGCAATGCCCAGAACGTGAGGATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGaaa                                                                                                                                                     <  7:240233/149‑1 (MQ=255)    catgttcgtcaccagcaccacccagttctatatcctgcgtttcctgctgggggcggccgaggccggcttcctgccaggcgtgctgtactacctgaccatgttgtaccccacctatcgccgcgggcgcatcattgccctgttcatgATCg                                                                                                                                                  <  8:351511‑M1/4‑1 (MQ=255)     atgttcgtcaccagcaccacccagttctatatcctgcgtttcctgctgggggcggccgaggccggcttcctgccaggcgtgctgtactacctgaccatgtggtaccccacctatcgccgcgggcgcatcattgccctgttcatgATCgg                                                                                                                                                 <  4:29926‑M1/5‑1 (MQ=255)            tcaccagcaccacccagttctatatcctgcgtttcctgctgggggcggccgaggccggcttcctgccaggcgtgctgtactacctgaccatgtggtaccccacctatcgccgcgggcgcatcattgccctgttcatgATCGGCCCGcc                                                                                                                                           <  4:397220‑M1/11‑1 (MQ=255)                ctgGAAATGGTTAGGCAATGCCCAGAACGTGAGGATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATc                                                                                                                                       <  1:206502/148‑1 (MQ=255)                   gAAATGGTTAGGCAATGCCCAGAACGTGAGGATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGc                                                                                                                                   <  2:262262/149‑1 (MQ=255)                    aaaTGGTTAGGCAATGCCCAGAACGTGAGGATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCt                                                                                                                                  <  3:189979/149‑1 (MQ=255)                             ggCAATGCCCAGAACGTGAGGATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACg                                                                                                                          <  8:40049/148‑1 (MQ=255)                                    cccAGAACGTGAGGATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGccc                                                                                                                   >  1:361338/1‑148 (MQ=255)                                      ctgcgttgcctgctggtggcggccgagtccggcttcctgccaggcgtgctgtactacctgcccatgtggtaccccacctatcgccgcgggcgcatcattgccctgttcatgATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGa                                                                                                                 >  4:13779‑M1/112‑148 (MQ=255)                                       aGAACGTGAGGATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATc                                                                                                               <  2:154457/149‑1 (MQ=255)                                         cgtttcctgctgggggcggccgaggccggcttcctgccaggcgtgctgtactacctgaccatgtggtaccccacctatcgccgcgggcgcatcattgccctgttcatgATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATc                                                                                                               >  8:100959‑M1/109‑147 (MQ=255)                                         cgtttcctgctgggggcggccgaggccggcttcctgccaggcgtgctgtactacctgaccatgtggtaccccacctatcgccgcgggcgcatcattgccctgttcatgATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCAt                                                                                                             >  3:397220‑M1/109‑149 (MQ=255)                                         aaCGTGAGGATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCAt                                                                                                             <  4:23269/149‑1 (MQ=255)                                            gTGAGGATGCCGAGCAAAACGCTGGCTATCGCCTCCAGCAGGAACACACACTGCCACCCATGCAACCCTTGAACCTGGTCGAAATGCCCCATGAACAAGCCACAAATCGGCCCGCCAAACACGCTCGACAACGGCAGCCCGATCATGaa                                                                                                          >  7:4773/1‑149 (MQ=255)                                                ggATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCgg                                                                                                                                                 <  3:174846/106‑1 (MQ=255)                                                ggATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCgg                                                                                                                                                 >  4:174846/1‑106 (MQ=255)                                                            aaaCGCTGGGGCTCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATgcgc                                                                                          >  3:397289/1‑149 (MQ=255)                                                             aaCGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGcc                                                                                         >  1:65037/1‑149 (MQ=255)                                                                    gggATCGCGTCCAGGAGGAACAGCCACTTCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCACGCCAATCACGCTCGACAACGTCAGCGCGATCATGAACAGGGCAATGATGCGCCCgcgg                                                                                    <  7:329242/147‑1 (MQ=255)                                                                    gggATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCgcggc                                                                                   <  1:430449/148‑1 (MQ=255)                                                                      gATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGa                                                                                 >  7:375358/1‑148 (MQ=255)                                                                           ccTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTg                                                                           >  5:94234/1‑149 (MQ=255)                                                                           ccTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCCATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTg                                                                           >  7:351511/1‑149 (MQ=255)                                                                           ccTCCAGCAGGAACAGCCACTGCCACCCATACAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTg                                                                           >  4:75670/1‑149 (MQ=255)                                                                            cTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTgg                                                                          <  7:216814/149‑1 (MQ=255)                                                                            cTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTgg                                                                          <  5:217563/149‑1 (MQ=255)                                                                               cagcagGAACAGCCACTGCCACCCATGCAAACCTTCAACCTGGTCGAAATGCCCCCTGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGTTggg                                                                         <  4:313184/147‑1 (MQ=255)                                                                                agcagGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTa                                                                      >  4:366246/1‑149 (MQ=255)                                                                                  cagGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTAc                                                                     >  4:349630/1‑148 (MQ=255)                                                                                     gAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACcaca                                                                 >  7:192622/1‑149 (MQ=255)                                                                                           ccACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGt                                                             >  3:311463/1‑147 (MQ=255)                                                                                             aCTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAgg                                                         <  2:92936/149‑1 (MQ=255)                                                                                                 tcACCAATGGATACCTTGAAGATTGTAGAAATTCCCGATTATCCAGCCAGAAATCTGACCGCCAATCACGCTCGACTAGGGCAGCCCGATGATGAACAGTGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAgg                                                         <  7:297431/144‑1 (MQ=255)                                                                                                 ccACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGgta                                                       <  6:186875/147‑1 (MQ=255)                                                                                                 ccACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGgta                                                       >  5:186875/1‑147 (MQ=255)                                                                                                   aCCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACTCTCGACAACGGCAGACCGATAATGAACCGGGCAATCAAGCGCCCCCGGCCATAGGTCGGCTACCACAAGCTCAGgtacatc                                                   >  8:297431/1‑145 (MQ=255)                                                                                                       aTGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAgg                                                         >  4:139626/1‑139 (MQ=255)                                                                                                       aTGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAgg                                                         <  3:139626/139‑1 (MQ=255)                                                                                                       aTGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCa                                               >  7:11690/1‑149 (MQ=255)                                                                                                        tacAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCAc                                              <  3:75670/147‑1 (MQ=255)                                                                                                        tGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCAc                                              >  7:53974/1‑149 (MQ=255)                                                                                                            aaCCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCt                                          >  7:133430/1‑149 (MQ=255)                                                                                                             aCCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTg                                         <  3:349630/149‑1 (MQ=255)                                                                                                              ccTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGGACCACATGGTCAGGTAGTACAGCACGCCTgg                                        <  4:397289/149‑1 (MQ=255)                                                                                                               cTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAgg                                                         <  4:171990/131‑1 (MQ=255)                                                                                                               cTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAgg                                                         >  3:171990/1‑131 (MQ=255)                                                                                                               cTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGc                                       <  6:94234/149‑1 (MQ=255)                                                                                                                      cTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTgg                                                                          >  8:294840/1‑107 (MQ=255)                                                                                                                      cTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTgg                                                                          <  7:294840/107‑1 (MQ=255)                                                                                                                      cTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGc                                >  8:69639/1‑149 (MQ=255)                                                                                                                       tGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTAc                                                                     >  1:22745/1‑111 (MQ=255)                                                                                                                       tGGTCGAAATGCCACATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTAc                                                                     <  2:22745/111‑1 (MQ=255)                                                                                                                        ggTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCg                              >  6:85523/1‑149 (MQ=255)                                                                                                                         gTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCgg                             <  8:11690/149‑1 (MQ=255)                                                                                                                              aaTGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCg                        <  2:361338/149‑1 (MQ=255)                                                                                                                               aTGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCgg                       <  1:318616/149‑1 (MQ=255)                                                                                                                                  ccccATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGgccg                    >  4:134928/1‑149 (MQ=255)                                                                                                                                  ccccATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGgcc                     <  4:217227/148‑1 (MQ=255)                                                                                                                                    ccATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGgccgcc                  >  4:250833/1‑149 (MQ=255)                                                                                                                                        gATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGGCCGcccc                >  3:29926/1‑147 (MQ=255)                                                                                                                                          tCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGGCCGCCCCcagc            <  7:69639/149‑1 (MQ=255)                                                                                                                                            cagccagAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGGCCGCCCCcagca           <  8:192622/148‑1 (MQ=255)                                                                                                                                             agccagAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGcc                               <  6:301688/127‑1 (MQ=255)                                                                                                                                             agccagAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCAGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGcc                               >  5:301688/1‑127 (MQ=255)                                                                                                                                                cagAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGGCCGCCCCCAGCAGGaaa      >  1:29998/1‑149 (MQ=255)                                                                                                                                                 agAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGGCCGCCCCCAGCAGGAAAc     >  6:227918/1‑149 (MQ=255)                                                                                                                                                    aaTCGGCCCGCCAATCACGCTCGACTACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGGGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTGGGCCGCCCCCAGCAGGAAACGCa  <  1:262399/149‑1 (MQ=255)                                                                                                                                                    aaTCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGGCCGCCCCCAGCAGGAAACGCa  <  3:279163/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CAGCCACTTGGCCTGCTGGAAATGGTTAGGCAATGCCCAGAACGTGAGGATGCCGAGCAAAACGCTGGGGATCGCCTCCAGCAGGAACAGCCACTGCCACCCATGCAAACCTTGAACCTGGTCGAAATGCCCCATGATCCAGCCAGAAATCGGCCCGCCAATCACGCTCGACAACGGCAGCCCGATCATGAACAGGGCAATGATGCGCCCGCGGCGATAGGTGGGGTACCACATGGTCAGGTAGTACAGCACGCCTGGCAGGAAGCCGGCCTCGGCCGCCCCCAGCAGGAAACGCA  >  NC_002947/4443325‑4443620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.