New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4552519 =	72 (1.010)	5 (0.070)	5/254	NT	7.1%	coding (90/522 nt)	rutR	transcriptional regulator, TetR family
	?	NC_002947	4552553 =	63 (0.930)					coding (56/522 nt)	rutR	transcriptional regulator, TetR family

CATCTCTTCGGCCCAGATCTTCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTC  >  NC_002947/4552372‑4552667                                                                                                                                                     |                                                                                                                                                     caTCTCTTCGGCCCAGATCTTCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTgca                                                                                                                                                     <  5:114847/149‑1 (MQ=255) aatcacaagatcgaaatccgccgacgcaatatcgaaaaaatcctgcaagcggcggaaaaggtgtttgcgagaagggctacggcgccacctccatgggcgatatcgccgagcaggctgagctgccacgctccaacctgcattattacttc                                                                                                                                                      >  3:189899‑M1/149‑149 (MQ=255)   tcacaagatcgaaatccgccgacgcaatatcgaaaaaatcctgcaagcggcggaaaaggtgtttgcgagaagggctacggcgccacctccatgggcgatatcgccgagcaggctgagctgccacgctccaacctgcattattacttCAg                                                                                                                                                    <  2:422206‑M1/3‑1 (MQ=255)    cgctTCGGCCCAGATCTTCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTgcagca                                                                                                                                                  >  1:281789/3‑149 (MQ=255)      caagatcgaaatccgccgacgcaatatcgaaaaaatcctgcaagcggcggaaaaggtgtttgcgagaagggctacggcgccacctccatgggcgatattgccgagcaggctgagctgccacgctccaacctgcattattacttCAGCAc                                                                                                                                                 <  6:69050‑M1/6‑1 (MQ=255)       ttCGGCCCAGATCTTCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTAGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACcg                                                                                                                                               >  6:226250/1‑149 (MQ=255)       aagatcgaaatccgccgacgcaatatcgaaaaaatcctgcaagcggcggaaaaggtgtttgcgagaagggctacggcgccacctccatgggcgatattgccgagcaggctgagctgccacgctccaacctgcattattacttCAGCAcc                                                                                                                                                >  5:69050‑M1/143‑149 (MQ=255)       aagatcgaaatccgccgacgcaatatcgaaaaaatcctgcaagcggcggaaaaggtgtttgcgagaagggctacggcgccacctccatgggcgatatcgccgagcaggctgagctgccacgctccaacctgcattattacttCAGCAcc                                                                                                                                                >  7:403529‑M1/143‑149 (MQ=255)        tCGGCCCAGATCTTCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACcgc                                                                                                                                              >  8:86234/1‑149 (MQ=255)         gatcgaaatccgccgacgcaatatcgaaaaaatcctgcaagcggcggaaaaggtgtttgcgagaagggctacggcgccacctccatgggcgatatcgccgagcaggctgagctgccacgctccaacctgcattattacttCAGCAcc                                                                                                                                                <  3:359608‑M1/7‑1 (MQ=255)         cGGCCCTGATCTTCGAGCCCTGCGGCCGCGAGCGCGAATGGCGCATCTTCGCCCGGAGGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACcgc                                                                                                                                              <  8:400351/148‑1 (MQ=255)           gCCCAGATCTTCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACcgcgcg                                                                                                                                           <  8:105175/149‑1 (MQ=255)           gCCCAGATCTTCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACcgcgcg                                                                                                                                           >  4:289351/1‑149 (MQ=255)             ccAGATCTTCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCgg                                                                                                                                          >  5:271220/1‑148 (MQ=255)               aatccgccgacgcaatatcgaaaaaatcctgcaagcggcggaaaaggtgtttgcgagaagggctacggcgccacctccatgggcgatatcgccgagcaggctgagctgccacgctccaacctgcattattacttCAGCACCGCGCGGaa                                                                                                                                        <  6:212845‑M1/15‑1 (MQ=255)               aGATCTTCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAAc                                                                                                                                       <  1:199127/149‑1 (MQ=255)                    ttCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGCGTGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACACCt                                                                                                                                   >  1:326127/1‑149 (MQ=255)                    ttCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTc                                                                                                                                  >  2:126586/1‑149 (MQ=255)                          cccAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCtt                                                                                                                            <  3:263723/149‑1 (MQ=255)                             aGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGt                                                                                                                         >  4:355042/1‑149 (MQ=255)                              gCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTg                                                                                                                        <  4:370883/149‑1 (MQ=255)                                tcgaaaaaatcctgcaagcggcggaaaaggtgtttgcgagaagggctacggcgccacctccatgggcgatatcgccgagcaggctgagctgccacgctccaacctgcattattacttCAGCACCGCGCGGAACAGCTCGTCCTTGGTg                                                                                                                        >  5:212845‑M1/118‑148 (MQ=255)                                 gCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTg                                                                                                                     <  2:326127/149‑1 (MQ=255)                                   cgcgAGCTCGAATGGCCCATCTTCGACCGGATGTAGC‑CGGTCAGCACCTCACGCGGGTCGTCGTAGTTCTCGAAGCACAGGGCGTCCTGCTTCCTCACATCCAGCTTGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGaa                                                                                                                   <  6:114561/149‑1 (MQ=255)                                      aaatcctgcaagcggcggaaaaggtgtttgcgagaagggctacggcgccacctccatgggcgatatcgccgagcaggctgagctgccacgctccaacctgcatttttacttCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGt                                                                                                                 >  1:89241‑M1/112‑149 (MQ=255)                                          gcgAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGtaataa                                                                                                            <  4:137818/149‑1 (MQ=255)                                           cgtaTGGCGCATCTTCGCCCGGTTGTAGA‑TTGTCAGCACCACACGCGGGGCGTCGAAGTTCTGGAAGCACTGGGGGTCCTGCTTCCACACATCGAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTTCTGAAGTaataat                                                                                                           <  6:438850/146‑1 (MQ=255)                                              aTGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCa                                                                                                        <  3:289351/149‑1 (MQ=255)                                                 gCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAAc                                                                                                                                       <  1:144800/115‑1 (MQ=255)                                                 gCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAAc                                                                                                                                       >  2:144800/1‑115 (MQ=255)                                                 gCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGt                                                                                                     <  3:355042/149‑1 (MQ=255)                                                 gCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGt                                                                                                     >  2:42518/1‑149 (MQ=255)                                                       cTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGc                                                                                               >  5:65612/1‑149 (MQ=255)                                                          cGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAg                                                                                                <  6:271220/145‑1 (MQ=255)                                                           gCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTg                                                                                            <  3:111606/148‑1 (MQ=255)                                                            cccGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGc                                                                                          >  3:45104/1‑149 (MQ=255)                                                                gATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCt                                                                                      <  2:400487/149‑1 (MQ=255)                                                                 aTGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGTAGTTCTCTAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCAGCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTc                                                                                     <  4:45104/149‑1 (MQ=255)                                                                  tGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGa                                                                                                 >  6:115862/1‑136 (MQ=255)                                                                  tGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGa                                                                                                 <  5:115862/136‑1 (MQ=255)                                                                  tGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCa                                                                                    <  7:100043/149‑1 (MQ=255)                                                                     aGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGcc                                                                                 >  3:195669/1‑149 (MQ=255)                                                                      gC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCt                                                                                >  4:86162/1‑149 (MQ=255)                                                                           gTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTc                                                                            <  6:65612/149‑1 (MQ=255)                                                                           gTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTc                                                                            <  6:314664/149‑1 (MQ=255)                                                                              aGCACCACACGCGGCTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACCCATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGc                                                                         <  7:285912/149‑1 (MQ=255)                                                                                caccacACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCg                                                                        >  6:84421/1‑148 (MQ=255)                                                                                caccacACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCg                                                                        <  5:84421/148‑1 (MQ=255)                                                                                caccacACGCGGGTCGTCGAAGTTCTCGAAGAACAGGGCCTCCTGGTTCCACACAACCAGCAGGACCAGCAGCACCGCGCCGAACAGCTCGTCGATGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCg                                                                        >  2:218289/1‑148 (MQ=255)                                                                                               gtcgAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCATGCTCGGCGATATAGCCCATGGAgg                                                        >  3:56944/1‑149 (MQ=255)                                                                                                tcgAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGt                                                       >  8:86960/1‑149 (MQ=255)                                                                                                tcgAAGTTCTCGAAGCACAGGGCGTCCTACTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGt                                                       >  3:212673/1‑149 (MQ=255)                                                                                                  gAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTgg                                                     >  7:4233/1‑149 (MQ=255)                                                                                                   aaGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATAGCCCATGGAGGTGgc                                                    >  7:174040/1‑149 (MQ=255)                                                                                                    aGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGgcg                                                   <  5:226250/149‑1 (MQ=255)                                                                                                         tcGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCg                                                >  5:158081/1‑147 (MQ=255)                                                                                                          cGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAg                                             >  7:242507/1‑149 (MQ=255)                                                                                                          cGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAg                                             >  5:417672/1‑149 (MQ=255)                                                                                                           gAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTa                                              <  1:126586/147‑1 (MQ=255)                                                                                                           gAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGc                                            >  2:392149/1‑149 (MQ=255)                                                                                                           gAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGc                                            >  6:400917/1‑149 (MQ=255)                                                                                                            gagcaggctgagctgccacgctccaacctgcattattacttCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGaa                                                                                                                   >  8:168551‑M1/42‑77 (MQ=255)                                                                                                            gagcaggctgagctgccacgctccaacctgcattattacttCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGaa                                                                                                                   <  7:168551‑M1/36‑1 (MQ=255)                                                                                                             aGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGccc                                          <  7:86234/149‑1 (MQ=255)                                                                                                              gCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCt                                         >  4:359608/1‑149 (MQ=255)                                                                                                                acaGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTtc                                       >  3:107719/1‑149 (MQ=255)                                                                                                                 caGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTtct                                      >  5:193934/1‑149 (MQ=255)                                                                                                                 caGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTtct                                      <  4:107719/149‑1 (MQ=255)                                                                                                                  aGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAg                                                         >  3:106910/1‑129 (MQ=255)                                                                                                                  aGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAg                                                         <  4:106910/129‑1 (MQ=255)                                                                                                                    ggCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGc                                   <  6:256500/149‑1 (MQ=255)                                                                                                                     gCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGc                                   >  5:8521/1‑148 (MQ=255)                                                                                                                          cTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAacac                             <  4:195669/149‑1 (MQ=255)                                                                                                                           tGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACAcc                            >  7:221839/1‑149 (MQ=255)                                                                                                                           tGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACAcc                            >  7:227978/1‑149 (MQ=255)                                                                                                                            gCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCt                           >  1:282764/1‑149 (MQ=255)                                                                                                                                ccACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTc                       >  7:343907/1‑149 (MQ=255)                                                                                                                                 cacacaTCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTcc                      <  2:281789/149‑1 (MQ=255)                                                                                                                                  acacaTCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTccg                     >  8:247040/1‑149 (MQ=255)                                                                                                                                    acaTCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTccgcc                   >  2:247434/1‑149 (MQ=255)                                                                                                                                      aTCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCcgccgc                 >  1:422206/1‑149 (MQ=255)                                                                                                                                      aTCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCcgccgc                 >  2:350085/1‑149 (MQ=255)                                                                                                                                      aTCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCcgccgc                 >  1:264252/1‑149 (MQ=255)                                                                                                                                           gcagGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTg              >  3:224800/1‑147 (MQ=255)                                                                                                                                           gcagGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCa            <  4:76377/149‑1 (MQ=255)                                                                                                                                                    gcagcaCCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGAtttttt   >  5:40874/1‑149 (MQ=255)                                                                                                                                                     CAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGa         >  7:206742‑M1/1‑142 (MQ=255)                                                                                                                                                     CAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGa         <  8:206742‑M1/142‑1 (MQ=255)                                                                                                                                                     CAGCACCGCGCGGAACAGCTCGGCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTc  >  3:358580‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CATCTCTTCGGCCCAGATCTTCGAGCCCAGCGGCCGCGAGCGCGAATGGCCCATCTTCGCCCGGATGTAGC‑TGGTCAGCACCACACGCGGGTCGTCGAAGTTCTCGAAGCACAGGGCGTCCTGCTTCCACACATCCAGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTC  >  NC_002947/4552372‑4552667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.