BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5404329 =	90 (1.260)	4 (0.060)	3/236	NT	5.4%	intergenic (‑627/+90)	PP_4746/PP_4748	transposase/amino acid ABC transporter substrate‑binding protein
*	?	NC_002947	5404391 =	62 (0.980)	4 (0.060)	3/236	NT	5.4%	intergenic (‑689/+28)	PP_4746/PP_4748	transposase/amino acid ABC transporter substrate‑binding protein

Only 100 of 106 total aligned reads displayed.

TGGTGCCGTGGGCCAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGG  >  NC_002947/5404182‑5404477

aggcactgggcaagaatatccaggccttgcacgcctcgggcgaaatcgcagaaatcctcgcctcgtttggcctggaccgcgaggctgcaaaagtgggggagccgaggatgattcagtaaagacaatcaaatcccgtaggcgcggcttTa                                                                                                                                                     >  5:122749‑M1/148‑149 (MQ=255)

 ggTGCCGTGGGCCAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAg                                                                                                                                                    >  2:320594/1‑149 (MQ=255)

     ctgggcaagaatatccaggccttgcacgcctcgggcgaaatcgcagaaatcctcgcctcgtttggcctggaccgcgaggctgcaaaagtgggggagccgaggatgattcagtaaagacaatcaaatcccgtaggcgcggcttTAGCcgc                                                                                                                                                >  3:82010‑M1/143‑149 (MQ=255)

     ctgggcaagaatatccaggccttgcacgcctcgggcgaaatcgcagaaatcctcgcctcgtttggcctggaccgcgaggctgcaaaagtgggggagccgaggatgattcagtaaagacaatcaaatcccgtaggcgcggcttTAGCcgc                                                                                                                                                >  5:91742‑M1/143‑149 (MQ=255)

     ccGTGGGCCAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCcgc                                                                                                                                                >  3:150607/1‑149 (MQ=255)

     ccGTGGGCCAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGCGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCcgc                                                                                                                                                >  5:273171/1‑149 (MQ=255)

        tGGGCCAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGaa                                                                                                                                             <  7:138861/149‑1 (MQ=255)

        tGGGCCAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGaa                                                                                                                                             <  8:273378/149‑1 (MQ=255)

           gCCAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATg                                                                                                                                           >  7:47712/1‑148 (MQ=255)

            ccAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGGGGCGGTAGCCGCGAATGaa                                                                                                                                         <  6:369059/149‑1 (MQ=255)

            ccAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGGGGCGGTAGCCGCGAATGaa                                                                                                                                         >  5:369059/1‑149 (MQ=255)

            ccAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGcc                                                                                                                                                  >  3:392859/1‑140 (MQ=255)

            ccAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGcc                                                                                                                                                  <  4:392859/140‑1 (MQ=255)

            ccAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGaa                                                                                                                                         <  4:40921/149‑1 (MQ=255)

            ccAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCGTTTCGGGTGTGTCGTCGTCCAGGGGGGCTTCGGTGCTCTCGGGTTGACGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGaa                                                                                                                                         <  6:65451/149‑1 (MQ=255)

             gaatatccaggccttgcacgcctcgggcgaaatcgcagaaatcctcgcctcgtttggcctggaccgcgaggctgcaaaagtgggggagccgatgatgattcagtaaagacaatcaaatcccgtaggcgcggcttTAGCCGCGAATGAAc                                                                                                                                        >  4:247434‑M1/135‑149 (MQ=255)

             gaatatccaggccttgcacgcctcgggcgaaatcgcagaaatcctcgcctcgtttggcctggaccgcgaggctgcaaaagtgggggagccgaggatgattcagtaaagacaatcaaatcccgtaggcgcggcttTAGCCGCGAATGAAc                                                                                                                                        <  5:272007‑M1/15‑1 (MQ=255)

             cAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAAc                                                                                                                                        <  7:275402/149‑1 (MQ=255)

             cAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAAc                                                                                                                                        <  8:321176/149‑1 (MQ=255)

             cAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCCTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAAc                                                                                                                                        <  6:381028/149‑1 (MQ=255)

              aGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGGTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAAc                                                                                                                                        >  5:301733/1‑148 (MQ=255)

                   gagCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTACGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAAc                                                                                                                                  <  4:401356/149‑1 (MQ=255)

                           gcgcgAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCAtt                                                                                                                          >  4:236965/1‑149 (MQ=255)

                            cgcgAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTc                                                                                                                         <  1:184140/149‑1 (MQ=255)

                                   gtggtgGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAg                                                                                                                  <  8:364960/149‑1 (MQ=255)

                                   gtggtgGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAg                                                                                                                  <  3:236965/149‑1 (MQ=255)

                                         gCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTcgcg                                                                                                            <  4:150607/149‑1 (MQ=255)

                                           aTCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGt                                                                                                          >  3:276356/1‑149 (MQ=255)

                                               gCCAGTGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTATGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGc                                                                                                                                <  7:155201/123‑1 (MQ=255)

                                               gCCAGTGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTATGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGc                                                                                                                                >  8:155201/1‑123 (MQ=255)

                                               gCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGt                                                                                                      <  1:244465/149‑1 (MQ=255)

                                                ccAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCt                                                                                                                       <  4:423459/131‑1 (MQ=255)

                                                ccAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCt                                                                                                                       >  3:423459/1‑131 (MQ=255)

                                                      tcctcgcctcgtttggcctggaccgcgaggctgcaaaagtgggggagccgaggatgattcagtaaagacaatcaantcccgtaggcgcggcttTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTcg                                                                                               >  3:114842‑M1/94‑149 (MQ=255)

                                                      tcctcgcctcgtttggcctggaccgcgaggctgcaaaagtgggggagccgaggatgattcagtaaagacaatcaaatcccgtaggcgcggcttTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTcg                                                                                               >  3:108860‑M1/94‑149 (MQ=255)

                                                       cAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTcgc                                                                                              <  2:73260/149‑1 (MQ=255)

                                                       cAGGCGCTTTTCGGGGTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTcgc                                                                                              <  6:105030/149‑1 (MQ=255)

                                                        ctcgcctcgtttggcctggaccgcgaggctgcaaaagtgggggagccgaggatgattcagtaaagacaatcaaatcccgtaggcgcggcttTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTcgcg                                                                                             >  1:261297‑M1/92‑149 (MQ=255)

                                                        aGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTcgcg                                                                                             <  8:58897/149‑1 (MQ=255)

                                                         ggCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGCGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCgg                                                                                            <  6:273171/149‑1 (MQ=255)

                                                          gcgcTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGc                                                                                           >  4:332370/1‑149 (MQ=255)

                                                          gcgcTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCAAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGc                                                                                           >  6:368432/1‑149 (MQ=255)

                                                           gcctcgtttggcctggaccgcgaggctgcaaaagtgggggagccgaggatgattcagtaaagacaatcaaatcccgtaggcgcggcttTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCgg                                                                                            >  4:156504‑M1/89‑147 (MQ=255)

                                                            gcTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTTCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCt                                                                                          >  4:73740/1‑148 (MQ=255)

                                                                  cGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCcg                                                                                   >  6:250987/1‑149 (MQ=255)

                                                                   gggTGTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGGTGAAGGGCTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCTTTCATTCGCGGCTAAAGCcgc                                                                                  <  4:64422/149‑1 (MQ=255)

                                                                     gTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTc                                                                                                                         >  6:268590/1‑108 (MQ=255)

                                                                     gTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTc                                                                                                                         <  5:268590/108‑1 (MQ=255)

                                                                            gtcgtaCATGGGGGCTTCGGTGCTCTCGGGTTGCAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATACCGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACggg                                                                         <  6:301733/149‑1 (MQ=255)

                                                                             tcgtcCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCgg                                                                                            <  6:176361/129‑1 (MQ=255)

                                                                             tcgtcCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCgg                                                                                            >  5:176361/1‑129 (MQ=255)

                                                                              cgtcCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCAAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGAt                                                                       <  5:368432/149‑1 (MQ=255)

                                                                                tcCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGAttt                                                                     <  6:11691/149‑1 (MQ=255)

                                                                                 ccATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGAttt                                                                     >  7:161647/1‑148 (MQ=255)

                                                                                  cATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTg                                                                    <  8:161647/148‑1 (MQ=255)

                                                                                   aTGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGAt                                                                  >  4:304603/1‑149 (MQ=255)

                                                                                    tGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGAtt                                                                 <  5:408400/149‑1 (MQ=255)

                                                                                       gggCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTc                                                              <  3:304603/149‑1 (MQ=255)

                                                                                        ggCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCcg                                                                                   <  4:416865/127‑1 (MQ=255)

                                                                                        ggCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCcg                                                                                   >  3:416865/1‑127 (MQ=255)

                                                                                        ggCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCt                                                             <  1:402518/149‑1 (MQ=255)

                                                                                           ttCGGTGCTCTCGGGTTGAATGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAATCCGAGCCTACGGGATTTGATTGTCttt                                                           >  1:392763/1‑148 (MQ=255)

                                                                                            tCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCTCCTACGGGATTTGATTGTCTTTAc                                                         >  6:288444/1‑149 (MQ=255)

                                                                                              ggTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCATGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTCATTCTCTTTACt                                                        >  6:149156/1‑148 (MQ=255)

                                                                                               gTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTg                                                       >  6:288958/1‑148 (MQ=255)

                                                                                                  ctctCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAatc                                                   <  4:276356/149‑1 (MQ=255)

                                                                                                  ctctCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAat                                                    <  3:73740/148‑1 (MQ=255)

                                                                                                    ctcGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAatcat                                                 >  1:289261/1‑149 (MQ=255)

                                                                                                    ctcGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAatcat                                                 >  5:250695/1‑149 (MQ=255)

                                                                                                     tcGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAatcatc                                                >  5:343650/1‑149 (MQ=255)

                                                                                                     tcGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAatcat                                                 >  4:189121/1‑148 (MQ=255)

                                                                                                            gAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCt                                         >  5:11788/1‑149 (MQ=255)

                                                                                                               ggTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTccc                                      >  7:119393/1‑149 (MQ=255)

                                                                                                                     ccGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACtt                                <  1:320594/149‑1 (MQ=255)

                                                                                                                     ccGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACtt                                >  4:398846/1‑149 (MQ=255)

                                                                                                                       gCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCTAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGTGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACtttt                              <  5:149156/149‑1 (MQ=255)

                                                                                                                        cagccagcGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTg                             >  4:65463/1‑149 (MQ=255)

                                                                                                                          gccagcGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCa                           <  2:418936/149‑1 (MQ=255)

                                                                                                                          gccagcGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCa                           <  5:250987/149‑1 (MQ=255)

                                                                                                                           ccagcGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCCCTTTTGCAg                          >  4:37464/1‑149 (MQ=255)

                                                                                                                           ccagcGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAg                          >  6:136002/1‑149 (MQ=255)

                                                                                                                            cagcGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGc                         <  8:119393/149‑1 (MQ=255)

                                                                                                                             agcGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGcc                        >  3:401866/1‑149 (MQ=255)

                                                                                                                               cGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTc                      >  1:349815/1‑149 (MQ=255)

                                                                                                                               cGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTc                      <  3:398846/149‑1 (MQ=255)

                                                                                                                                  aCCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTcgcg                   <  2:349815/149‑1 (MQ=255)

                                                                                                                                  aCCTGCAAGGGAGGCGATAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTcgcg                   >  6:273060/1‑149 (MQ=255)

                                                                                                                                   ccTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCgg                  <  6:174190/149‑1 (MQ=255)

                                                                                                                                     tGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTc                >  7:85368/1‑149 (MQ=255)

                                                                                                                                      gCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTc                >  2:54347/1‑148 (MQ=255)

                                                                                                                                       cAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTc                >  4:97734/1‑147 (MQ=255)

                                                                                                                                        aaGGGATGCGGTTGCCGAGAATGAACGATAACGCCTCATTCCTTAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAg             <  7:385089/149‑1 (MQ=255)

                                                                                                                                        aaGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAg             >  4:177134/1‑149 (MQ=255)

                                                                                                                                         aGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTAAGGGAAAATCCTCGGCTGCCCCCCGTTTGCAGGCGCGCGGTGCAgg            >  1:364568/1‑149 (MQ=255)

                                                                                                                                         aGGGAGGAGGTAGCCGCGAATGCACGATAACGCCTCCTTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAgg            <  1:298934/149‑1 (MQ=255)

                                                                                                                                          gggAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGc           >  1:221735/1‑149 (MQ=255)

                                                                                                                                           ggAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGcc          >  5:279718/1‑149 (MQ=255)

                                                                                                                                            gAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCa         <  6:343650/149‑1 (MQ=255)

                                                                                                                                               gCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCGACTTTTGCAGCCTCGCGGTCCAGGCCAAAc      <  1:38492/149‑1 (MQ=255)

                                                                                                                                                   TAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAAcgagg  >  5:288444‑M1/1‑149 (MQ=255)

TGGTGCCGTGGGCCAGGCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGG  >  NC_002947/5404182‑5404477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.