New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5999313 =75 (1.050)4 (0.060) 4/238 NT 6.4% intergenic (‑168/‑153) ycaC‑IV/PP_5256 putative hydrolase/cyclic nucleotide‑binding protein
?NC_002947 5999373 = 50 (0.790)intergenic (‑228/‑93) ycaC‑IV/PP_5256 putative hydrolase/cyclic nucleotide‑binding protein

GATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGA  >  NC_002947/5999168‑5999460
                                                                                                                                                 |                                                                                                                                                   
gATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGccc                                                                                                                                                  >  1:140122/1‑149 (MQ=255)
 gatcaaggcgcaaccgagcaacaacggggacgactggatgaacgccagcatggtgatctcgggggtgaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggccccttcgcgacttGCCCg                                                                                                                                                 <  8:223135‑M1/5‑1 (MQ=255)
   tcaaggcgcaaccgagcaacaacggggacgactggatgaacgacagcatggtgatctcgggggtgaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggccccttcgcgacttGCCCGt                                                                                                                                                <  4:111257‑M1/6‑1 (MQ=255)
   gTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGtt                                                                                                                                               >  2:289577/1‑149 (MQ=255)
     aaggcgcaaccgagcaacaacggggacgactggatgaacgccagcatggtgatctcgggggtgaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggccccttcgcgacttGCCCGTTc                                                                                                                                              >  1:435457‑M1/141‑148 (MQ=255)
      cAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTcc                                                                                                                                             >  1:30865/1‑148 (MQ=255)
      aggcgcaaccgagcaacaacggggacgactggatgaacgccagcatggtgatctcgggggtgaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggccccttcgcgacttGCCCGTTcc                                                                                                                                             <  5:125844‑M1/9‑1 (MQ=255)
      aggcgcaaccgagcaacaacggggacgactggatgaacgccagcatggtgatctcgggggtgaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggccccttcgcgacttGCCCGTTcc                                                                                                                                             <  2:380938‑M1/9‑1 (MQ=255)
       aGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCca                                                                                                                                           <  1:385620/149‑1 (MQ=255)
        gcgcaaccgagcaacaacggggacgactggatgaacgccagcatggtgatctcgggggtgaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggccccttcgcgacttGCCCGTTCCcac                                                                                                                                          >  7:4275‑M1/138‑149 (MQ=255)
        gTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCca                                                                                                                                           >  3:25057/1‑148 (MQ=255)
         tAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCca                                                                                                                                           >  2:333178/1‑147 (MQ=255)
          gcaaccgagcaacaacggggacgactggatgaacgccagcatggtgatctcgggggttaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggccccttcgcgacttGCCCGTTCCCACAg                                                                                                                                        >  7:180842‑M1/136‑149 (MQ=255)
             ttGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAg                                                                                                                                        >  1:399681/1‑146 (MQ=255)
             ttGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAg                                                                                                                                        <  2:399681/146‑1 (MQ=255)
               gggTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGAt                                                                                                                                    <  4:25057/148‑1 (MQ=255)
               gggTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGAt                                                                                                                                    <  2:62763/148‑1 (MQ=255)
               gggTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATc                                                                                                                                   >  1:1891/1‑149 (MQ=255)
               gggTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATc                                                                                                                                   >  4:402130/1‑149 (MQ=255)
                ggtggatCGCGATGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATc                                                                                                                                   <  4:406645/142‑1 (MQ=255)
                ggTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATc                                                                                                                                   <  5:244160/148‑1 (MQ=255)
                ggTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATc                                                                                                                                   <  4:181100/148‑1 (MQ=255)
                ggTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATc                                                                                                                                   <  4:153916/148‑1 (MQ=255)
                 gtgtTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCg                                                                                                                                  >  7:261684/1‑148 (MQ=255)
                   gtTTCGCGTTGATTGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTTCCTTTAGCGTTCTGTTTTAGGAATGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCgggc                                                                                                                               <  7:271048/149‑4 (MQ=255)
                    tttCGCGTTTATGGGATAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCTGGCACGCCCGTTCCCACAGGGATCgggc                                                                                                                               <  7:385110/148‑4 (MQ=255)
                      tCGCGTTGATGCGAGAAGATTAAACCCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACaa                                                                                                                             <  4:189843/148‑1 (MQ=255)
                        gcgTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGa                                                                                                                           <  1:8619/148‑1 (MQ=255)
                         cgTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCTCGGGCACGCCCGTTCCCACAGGGATCGCACAAGAtt                                                                                                                         <  1:289577/149‑1 (MQ=255)
                              aTGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCaaa                                                                                                                     <  2:30865/148‑1 (MQ=255)
                              aTGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCaa                                                                                                                      <  5:274862/147‑1 (MQ=255)
                              aTGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCaa                                                                                                                      >  6:274862/1‑147 (MQ=255)
                              aTGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTCGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCaaaa                                                                                                                    >  6:254606/1‑149 (MQ=255)
                                gggAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGGTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAAc                                                                                                                   >  5:411488/1‑148 (MQ=255)
                                   agaagaTTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAgc                                                                                                               >  6:61199/1‑149 (MQ=255)
                                   agaagaTTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAgc                                                                                                               >  7:115838/1‑149 (MQ=255)
                                       gaTTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCtt                                                                                                           >  7:240401/1‑149 (MQ=255)
                                          tAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTAc                                                                                                        >  8:44030/1‑149 (MQ=255)
                                          acgccagcatggtgatctcgggggtgaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggccccttcgcgacttGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTAc                                                                                                        <  4:73091‑M1/46‑1 (MQ=255)
                                           aaaaCCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTAc                                                                                                        <  3:402130/148‑1 (MQ=255)
                                               agcatggtgatctcgggggtgaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggccccttcgcgacttGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCtgtg                                                                                                   >  3:73091‑M1/99‑149 (MQ=255)
                                                caccaccTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTgg                                                                                                  >  7:302708/1‑149 (MQ=255)
                                                  ccaccTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTggg                                                                                                 >  4:74636/1‑148 (MQ=255)
                                                    gtgatctcgggggtgaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggcctcttcgcgggcacGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGaa                                                                                               >  8:376962‑M1/94‑148 (MQ=255)
                                                      cattGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTGGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACgg                                                                                            <  8:293479/147‑1 (MQ=255)
                                                       gatctcgggggtgaggggagggctgtgggtagtaatagagcaggtttgccaggcaggcaatgcaagcctgtgctggccccttcgcgacttGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACgg                                                                                            >  4:376649‑M1/91‑148 (MQ=255)
                                                           gAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCaa                                                                                        <  4:352525/148‑1 (MQ=255)
                                                            aGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGt                                                                                      <  1:263006/149‑1 (MQ=255)
                                                                gTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGACACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTcgc                                                                                   >  7:331172/1‑148 (MQ=255)
                                                                    aTAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAgg                                                                              <  6:411488/149‑1 (MQ=255)
                                                                    aTAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAg                                                                               <  8:240401/148‑1 (MQ=255)
                                                                     tAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAggg                                                                             <  5:133296/149‑1 (MQ=255)
                                                                     tAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAgg                                                                              <  1:333178/148‑1 (MQ=255)
                                                                     tAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGACACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAgg                                                                              <  8:331172/148‑1 (MQ=255)
                                                                       gTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGc                                                                           <  8:302708/149‑1 (MQ=255)
                                                                          gTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAg                                                                        >  6:174458/1‑149 (MQ=255)
                                                                             tttGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGTGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCAAGca                                                                      >  7:185331/1‑148 (MQ=255)
                                                                                gCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAgg                                                                  >  5:83625/1‑149 (MQ=255)
                                                                                       gCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTAGCGGTCACGCCCGTTCCCACATGGATCGCACAAGATTCAAAACCAGGGCTTTACCTGTGGGAACGGGCAAGTCGCTAAGGGGCCAGCACAGGCTTGCa                                                            <  6:169025/148‑1 (MQ=255)
                                                                                          ttCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATtgc                                                        >  5:318627/1‑149 (MQ=255)
                                                                                             tGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATtgcctg                                                     >  4:135865/1‑149 (MQ=255)
                                                                                                tttAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATtgcctgcc                                                   <  8:261684/148‑1 (MQ=255)
                                                                                                  tAGTAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGGACGCCCGTTCCCAAAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGTAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGcctgcctg                                                 <  2:388572/148‑1 (MQ=255)
                                                                                                   aGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTgg                                                <  5:61199/148‑1 (MQ=255)
                                                                                                       aCGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAAc                                           <  2:140122/149‑1 (MQ=255)
                                                                                                        cGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAAc                                                                                              <  4:304774/97‑1 (MQ=255)
                                                                                                         gATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCt                                         <  3:374812/149‑1 (MQ=255)
                                                                                                          atatatTGGGTTTGGTTTTCCTGGCCGCTTCCCGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGcctgcctg                                                 <  4:411998/139‑1 (MQ=255)
                                                                                                          aTAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGCACGCCCCTTCCCACAGGGATCGGACAAGATTCAAAACCAGGGCATTACCTGTGGGTACGGGCAAGTCGCGAAGGGGCCAGCACCGGCTTGCATTGcctgcctg                                                 >  3:411998/1‑139 (MQ=255)
                                                                                                           tAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACggg                                                                                           >  5:231705/1‑97 (MQ=255)
                                                                                                           tAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACggg                                                                                           <  6:231705/97‑1 (MQ=255)
                                                                                                             gATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGct                                      <  7:44030/148‑1 (MQ=255)
                                                                                                                 ggCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTAt                                  <  2:1891/148‑1 (MQ=255)
                                                                                                                  gCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTAtt                                 <  5:174458/148‑1 (MQ=255)
                                                                                                                    gTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATtac                               >  4:132342/1‑148 (MQ=255)
                                                                                                                     ttGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGTGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATtacta                             <  8:185331/149‑1 (MQ=255)
                                                                                                                     ttGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATtacta                             <  8:115838/149‑1 (MQ=255)
                                                                                                                       ggTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTAcc                           >  1:380938/1‑149 (MQ=255)
                                                                                                                        gTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCACACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTAcc                           >  1:91362/1‑148 (MQ=255)
                                                                                                                             gCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGc                     >  7:332374/1‑149 (MQ=255)
                                                                                                                               tGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTg                                        <  5:382971/128‑1 (MQ=255)
                                                                                                                               tGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTg                                        >  6:382971/1‑128 (MQ=255)
                                                                                                                                 gCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctc                 <  3:74636/149‑1 (MQ=255)
                                                                                                                                  ccTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcc                >  8:388162/1‑149 (MQ=255)
                                                                                                                                   ctctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTgg                                                <  6:153038/116‑1 (MQ=255)
                                                                                                                                   ctctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTgg                                                >  5:153038/1‑116 (MQ=255)
                                                                                                                                    tctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcccc              >  3:111257/1‑149 (MQ=255)
                                                                                                                                             gCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCg     <  6:83625/149‑1 (MQ=255)
                                                                                                                                                 GCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTGTATTACTACCCACAGCCCTCCCCTCACCCCCgaga  <  3:253169‑M1/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
GATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGA  >  NC_002947/5999168‑5999460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.