New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2317642 =	55 (0.770)	4 (0.060)	4/256	NT	7.3%	coding (1446/1548 nt)	PP_2038	long‑chain‑fatty‑acid‑‑CoA ligase
	?	NC_002947	2317686 =	49 (0.720)					coding (1490/1548 nt)	PP_2038	long‑chain‑fatty‑acid‑‑CoA ligase

AAGCGGTGCGGGCGGTGATCGTGCTCAAGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTGGCTTCGTTCGCAACGAAATC  >  NC_002947/2317539‑2317827                                                                                                                                                      |                                                                                                                                              aaGCGGTGCGGGCGGTGATCGTGCTCAAGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAg                                                                                                                                              <  5:48754/149‑1 (MQ=255)    ctgggccttttcgcttggctgatacatggtcgttcctcgtgtcagatacggcgttcgctgttttgccagtaggcgtcacggatcaaccggcgcaccacctTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAggt                                                                                                                                            >  3:288403‑M1/101‑148 (MQ=255)    ctgggccttttcgcttggctgatacatggtcgttcctcgtgtcagatacggcgttcgctgttttgccagtaggcgtcacggatcaaccggcgcaccacctTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAgg                                                                                                                                             >  8:213382‑M1/101‑147 (MQ=255)    ctgggccttttcgcttggctgatacatggtcgttcctcgtgtcagatacggcgttcgctgttttgccagtaggcgtcacggatcaaccggcgcaccacctTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAg                                                                                                                                              >  5:8499‑M1/101‑146 (MQ=255)      gTGCGGGCGGTGATCGTGCTCAAGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAggtggt                                                                                                                                         <  7:183614/149‑1 (MQ=255)          gggcggTGATCGTGCTCAAGTCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTgcgc                                                                                                                                     <  8:33927/149‑1 (MQ=255)            gcggTGATCGTGCTCAAGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCg                                                                                                                                   >  6:430016/1‑149 (MQ=255)              ggTGATCGTGCTCAAGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGt                                                                                                                                 <  1:257572/149‑1 (MQ=255)                  aTCGTGCTCAAGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGAt                                                                                                                             >  1:6967/1‑149 (MQ=255)                       gCTCAAGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGt                                                                                                                         >  1:351077/1‑148 (MQ=255)                        cTCAAGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGa                                                                                                                       <  1:190563/149‑1 (MQ=255)                         tCAAGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCCGTTGATCCGTGAc                                                                                                                      >  3:328930/1‑149 (MQ=255)                           aaGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGAc                                                                                                                      <  2:57510/147‑1 (MQ=255)                             gCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGcc                                                                                                                   >  3:288488/1‑148 (MQ=255)                                gggCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACt                                                                                                               <  5:33018/149‑1 (MQ=255)                                 ggCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGATGCCTACTg                                                                                                              >  2:193389/1‑149 (MQ=255)                                   cATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGc                                                                                                            <  1:82572/149‑1 (MQ=255)                                      ggCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCaa                                                                                                          >  4:94365/1‑148 (MQ=255)                                      ggCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCaa                                                                                                          >  4:137151/1‑148 (MQ=255)                                             caggagcaggaCGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTg                                                                                                              <  8:79102/137‑1 (MQ=255)                                             caggagcaggaCGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTg                                                                                                              >  7:79102/1‑137 (MQ=255)                                              aggagcaggaCGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGaa                                                                                                 <  5:327886/149‑1 (MQ=255)                                               ggagcaggaCGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATGCGTGACGCCTACTGGCAAAACAGCGAAc                                                                                                <  1:248115/149‑1 (MQ=255)                                                         gTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCt                                                                                       <  6:52223/148‑1 (MQ=255)                                                          tCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAACAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGa                                                                                     >  7:380387/1‑149 (MQ=255)                                                             tCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCTAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTCCTGGCAAAACAGCGAACGCCGTATCTGacac                                                                                  <  1:265779/149‑1 (MQ=255)                                                               gAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGa                                                                                <  4:332787/149‑1 (MQ=255)                                                                aaCATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGc                                                                                                                    >  6:293876/1‑112 (MQ=255)                                                                aaCATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGc                                                                                                                    <  5:293876/112‑1 (MQ=255)                                                                aaCATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAg                                                                               >  1:46855/1‑149 (MQ=255)                                                                   aTTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGaa                                                                            <  2:351077/149‑1 (MQ=255)                                                                       cgcCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAATGACCCAACGGCAAGGTGGTGCGCCGGTTGATCTGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACg                                                                          >  1:348441/1‑149 (MQ=255)                                                                       cgcCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGAc                                                                        >  6:270471/1‑149 (MQ=255)                                                                        gcCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGAc                                                                        >  6:314060/1‑148 (MQ=255)                                                                          ccAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCAt                                                                     <  2:46855/149‑1 (MQ=255)                                                                                 cTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAg                                                              <  2:6967/149‑1 (MQ=255)                                                                                     ccGGTTTCAAGAAACCACGTGCCGTGGAGTTCGTCAGCGAGATGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGAGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGcc                                                            >  1:243229/1‑147 (MQ=255)                                                                                     ccGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCATACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCaa                                                          <  5:223375/149‑1 (MQ=255)                                                                                         tttCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGCACGACCATTTATCATCCAAGCg                                                       >  6:257727/1‑148 (MQ=255)                                                                                         tttCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCg                                                       >  8:304900/1‑148 (MQ=255)                                                                                             aaGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGaaaa                                                   <  3:94365/148‑1 (MQ=255)                                                                                              aGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAgg                                                 <  5:430016/149‑1 (MQ=255)                                                                                                      accttgccgttggggtttttcggcagctcgctgacgaagtccacggcaAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCcag                                            >  3:288403‑M2/49‑148 (MQ=255)                                                                                                       ccttgccgttggggtttttcggcagctcgctgacgaagtccacggcaAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCcag                                            >  8:213382‑M2/48‑147 (MQ=255)                                                                                                        cttgccgttggggtttttcggcagctcgctgacgaagtccacggcaAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCcag                                            >  5:8499‑M2/47‑146 (MQ=255)                                                                                                          CCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGatc                                      >  4:288488‑M1/1‑148 (MQ=255)                                                                                                            GTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGatcatc                                   <  4:2948‑M1/149‑1 (MQ=255)                                                                                                                aCTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAgg                               >  8:317836/1‑149 (MQ=255)                                                                                                                  ttCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGTTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGc                              >  6:77353/1‑148 (MQ=255)                                                                                                                     gTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCAt                           >  3:380564/1‑148 (MQ=255)                                                                                                                          cGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTgg                     >  4:216801/1‑149 (MQ=255)                                                                                                                             cagctcgctgacgaagtccacggcaAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTg                      <  6:8499‑M2/122‑1 (MQ=255)                                                                                                                              cTGCCGAAAAA‑‑CCCCTACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGTAACGACCATGTATCAGCCAAGCGAAAAGGCCCATCAGATCATCGAGGCCATCAGTGGCttc                 <  2:243229/149‑1 (MQ=255)                                                                                                                              cTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTGGCttc                 >  8:324858/1‑149 (MQ=255)                                                                                                                                 ccGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTGGCttcgt               <  5:77353/148‑1 (MQ=255)                                                                                                                                  cGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTGGCttcgttc             <  5:314060/149‑1 (MQ=255)                                                                                                                                    aaaaa‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTTACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGAGAAAAGGCCAAGCAGATCATCGAGGCCATCAGTGGCttcgttcg            >  1:269662/1‑148 (MQ=255)                                                                                                                                      aaa‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTGGCTTCGTTCGCaa         <  3:216801/149‑1 (MQ=255)                                                                                                                                        a‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTGGCTTCGTTCGCAAc        >  8:372968/1‑148 (MQ=255)                                                                                                                                              cAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTGGCTTCGTTCGCAACGAAAt   >  4:379990/1‑149 (MQ=255)                                                                                                                                               cacggcaAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTGGCTTCGTTCGCAACGAAATc  <  4:288403‑M2/142‑1 (MQ=255)                                                                                                                                               aaCGGCAAGGTGGTGCGCCGGTTGATCCGTGATGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTGGCTTCGTTCGCAACGAAATc  <  1:193389/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                              AAGCGGTGCGGGCGGTGATCGTGCTCAAGCCGGGCATGGCGCTGCAGGAGCAGGACGTCATCGAACATTGCGCCCAGGCCCTGGCCGGTTTCAAGAAACCACGTGCCGTGGACTTCGTCAGCGAGCTGCCGAAAAA‑‑CCCCAACGGCAAGGTGGTGCGCCGGTTGATCCGTGACGCCTACTGGCAAAACAGCGAACGCCGTATCTGACACGAGGAACGACCATGTATCAGCCAAGCGAAAAGGCCCAGCAGATCATCGAGGCCATCAGTGGCTTCGTTCGCAACGAAATC  >  NC_002947/2317539‑2317827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.