New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2522920 =	59 (0.820)	4 (0.060)	4/254	NT	6.5%	coding (4171/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein
	?	NC_002947	2522968 =	59 (0.870)					coding (4219/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein

TAGCCGTTTGCGGTTGCCCAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGAAC  >  NC_002947/2522820‑2523115                                                                                                                                                      |                                                                                                                                                    tAGCCGTTTGCGGTTGCCAAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGAAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGt                                                                                                                                                     >  4:356735/1‑149 (MQ=255)   gCCGTTTGCGGTTGCCCAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTc                                                                                                                                                   >  6:333643/1‑149 (MQ=255)          gCGGTTGCCCAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGgcgc                                                                                                                                             <  5:115754/148‑1 (MQ=255)           cGGTTGCCCAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATGGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGcc                                                                                                                                            <  6:100235/148‑1 (MQ=255)           cGGTTGCCCAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGcc                                                                                                                                            <  2:5393/148‑1 (MQ=255)                gCCCAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTAcc                                                                                                                                      >  5:148866/1‑149 (MQ=255)                  ccAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGACAGCGCGCGTTCTGGCGCCGTTACCTg                                                                                                                                    >  5:27469/1‑149 (MQ=255)                    aaCCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATATCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTgcg                                                                                                                                  >  3:425689/1‑149 (MQ=255)                       cAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTgcgc                                                                                                                                 >  7:336757/1‑147 (MQ=255)                         gCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGc                                                                                                                             <  1:144630/149‑1 (MQ=255)                         gCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCAGGTAACGGCGCCAga                                                                                                                             <  5:131605/149‑2 (MQ=255)                         gCCGTATGCCATGCGCTATCCCGATGCTGTCGAGCTGACACAGGCGCCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCTATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAg                                                                                                                              >  1:90180/1‑149 (MQ=255)                          ccGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAAAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGc                                                                                                                             >  8:309430/1‑148 (MQ=255)                           cGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCAGGTAACGGCGCCAgaac                                                                                                                           <  2:280394/149‑4 (MQ=255)                                 ccATGCGCTATCCCGCTGCTGTCTCGCTGTCACAGGC‑CCAGGTATCGGTTGCTTTTCTGCGGGTTACTCGCGCGCAGACCATCGATGGCCTTACCGATAGCCTGATCCAGCGCGTGTTCTGGCGCCGTTACCTGCGCCAGCAACAt                                                                                                                        <  8:65516/146‑1 (MQ=255)                                 ccATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGAc                                                                                                                     <  7:291553/149‑1 (MQ=255)                                  cATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGAc                                                                                                                     >  8:318144/1‑148 (MQ=255)                                  cATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACAATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGAc                                                                                                                     >  7:275172/1‑148 (MQ=255)                                     gcgcTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCaaa                                                                                                                 >  4:198196/1‑149 (MQ=255)                                      cgcTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCaaa                                                                                                                 <  5:333643/148‑1 (MQ=255)                                         tATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTAcc                                                                                                                                      <  7:349393/124‑1 (MQ=255)                                         tATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTAcc                                                                                                                                      >  8:349393/1‑124 (MQ=255)                                           tCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCCCCAGCAACATGACCAAATGTTc                                                                                                            >  8:343786/1‑148 (MQ=255)                                                 tGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGccc                                                                                                     <  6:148866/149‑1 (MQ=255)                                                    tGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCt                                                                                                    >  4:238086/1‑147 (MQ=255)                                                         cgcTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTgc                                                                                                                                   <  6:199248/111‑1 (MQ=255)                                                         cgcTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTgc                                                                                                                                   >  5:199248/1‑111 (MQ=255)                                                            tGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGAt                                                                                          >  4:37953/1‑149 (MQ=255)                                                              acacAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTa                                                                                        <  4:344964/149‑1 (MQ=255)                                                                acaGGC‑CCAGGTTGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGTGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCGCAGTGCGGATTaca                                                                                      >  4:334459/1‑149 (MQ=255)                                                                    gC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCg                                                                                  >  1:43182/1‑149 (MQ=255)                                                                     c‑ccAGGTAGAGGATGCATTTCTGCGGGTTACGCGCTCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCgg                                                                                 <  8:336757/149‑1 (MQ=255)                                                                     c‑ccAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCgg                                                                                 >  6:355208/1‑149 (MQ=255)                                                                       ccAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGgc                                                                                >  3:165730/1‑149 (MQ=255)                                                                       ccAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGgc                                                                                <  5:355208/149‑1 (MQ=255)                                                                                 gATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGa                                                                      <  3:238086/149‑1 (MQ=255)                                                                                 gATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCCGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCtt                                                                        >  5:43213/1‑147 (MQ=255)                                                                                  aTGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAg                                                                     <  7:318144/149‑1 (MQ=255)                                                                                  aTGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAg                                                                     >  8:201667/1‑149 (MQ=255)                                                                                      aTTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATTTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGc                                                                 <  3:356735/149‑1 (MQ=255)                                                                                      aTTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTg                                                                  >  8:214835/1‑148 (MQ=255)                                                                                                gTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACg                                                       >  2:135590/1‑149 (MQ=255)                                                                                                      cgcgcgctggctcaggctatcggtcaggccctcgatggtctgcgcgcgTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGt                                                 >  4:52514‑M2/49‑149 (MQ=255)                                                                                                       GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTc                                                <  3:209739‑M1/149‑1 (MQ=255)                                                                                                       GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCACTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGtcctctc                                                <  7:191858‑M1/149‑4 (MQ=255)                                                                                                         gcgctggctcaggctatcggtcaggccctcgatggtctgcgcgcgTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCtt                                              >  5:11933‑M2/46‑149 (MQ=255)                                                                                                         GCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCtt                                              >  1:339055‑M1/1‑149 (MQ=255)                                                                                                          cgctggctcaggctatcggtcaggccctcgatggtctgcgcgcgTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTg                                             <  3:52514‑M2/105‑1 (MQ=255)                                                                                                          CGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTg                                             >  3:37953‑M1/1‑149 (MQ=255)                                                                                                          CGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTg                                             >  7:58956‑M1/1‑149 (MQ=255)                                                                                                                ccATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAAc                                                        >  4:37768/1‑132 (MQ=255)                                                                                                                ccATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAAc                                                        <  3:37768/132‑1 (MQ=255)                                                                                                                 cATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCcgg                                      >  3:377634/1‑149 (MQ=255)                                                                                                                 cATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCcgg                                      >  6:50955/1‑149 (MQ=255)                                                                                                                      aGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGcc                                 >  5:177218/1‑149 (MQ=255)                                                                                                                      aGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGcc                                 <  7:309430/149‑1 (MQ=255)                                                                                                                       gggCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCt                                <  8:275172/149‑1 (MQ=255)                                                                                                                        ggCCTGAGCGTTAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCtt                               <  2:90180/149‑1 (MQ=255)                                                                                                                         gCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTc                              <  3:198196/149‑1 (MQ=255)                                                                                                                           cTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTc                              >  3:107388/1‑147 (MQ=255)                                                                                                                             tcaggccctcgatggtctgcgcgcgTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGagc                          <  6:11933‑M2/124‑1 (MQ=255)                                                                                                                              aCCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGag                           >  5:359967/1‑147 (MQ=255)                                                                                                                                cGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGagcagc                       <  6:146087/149‑1 (MQ=255)                                                                                                                                  aTAGCCTGAGCCAGCGCGCGTTCTGGTGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCaa                     >  4:412909/1‑149 (MQ=255)                                                                                                                                  aTAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTAGATGCCCTCAGTGCGGAATACACTAGGCGCACGCATTAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCaa                     >  6:56063/1‑149 (MQ=255)                                                                                                                                      ccTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGGTGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTAc                 >  4:181513/1‑149 (MQ=255)                                                                                                                                      ccTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGag                           >  6:165606/1‑139 (MQ=255)                                                                                                                                      ccTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGag                           <  5:165606/139‑1 (MQ=255)                                                                                                                                      ccTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTAc                 >  3:245519/1‑149 (MQ=255)                                                                                                                                       cTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACg                >  6:95481/1‑149 (MQ=255)                                                                                                                                          aGCCAGCGCGCGTTCTGGTGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCg             <  3:412909/149‑1 (MQ=255)                                                                                                                                            ccAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGc           <  5:95481/149‑1 (MQ=255)                                                                                                                                              aGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTa         <  5:50955/149‑1 (MQ=255)                                                                                                                                                cgcgcgTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACa       <  4:425689‑M2/143‑1 (MQ=255)                                                                                                                                                 gcgcgTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAg      <  2:363761‑M2/144‑1 (MQ=255)                                                                                                                                                  cgcgTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAgg     <  5:339537‑M2/145‑1 (MQ=255)                                                                                                                                                  cgcgTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAg      >  1:305299‑M2/5‑148 (MQ=255)                                                                                                                                                    cgTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTGCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGGCTTGGCGCCGGCGGCCGTCGAGCAGCAACTACGCCGGCTACAGGaa   <  3:334459‑M2/147‑1 (MQ=255)                                                                                                                                                     tttCTGGCGCGGTTCCCTGCGCCAGCAACATCACCAAATGTGCGATGCCCTCAGTGCGTTTTACACTCGGCGCACGTTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGAAc  <  1:135590/148‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    TAGCCGTTTGCGGTTGCCCAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGC‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGCGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCCAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGAAC  >  NC_002947/2522820‑2523115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.