New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2601777	54 (0.750)	4 (0.060)	4/252	NT	7.1%	coding (1254/1575 nt)	PP_2279	head‑to‑tail joining protein
	?	NC_002947	= 2601810	54 (0.800)					coding (1287/1575 nt)	PP_2279	head‑to‑tail joining protein

AGCCGCCTTGGGCGGTGTCTATTCCATCCTCAGCCAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTGGGATCGACACAGACGGCCTGGT  >  NC_002947/2601663‑2601956                                                                                                                                                      |                                                                                                                                                   aGCCGCCTTGGGCGGTGTCTATTCCATCCTCAGCCAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGg                                                                                                                                                   >  1:254803‑M2/1‑148 (MQ=255)          gggCGGTGTCTATTCCATCCTCAGCCAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATTTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTTACGGTTATGGAGGCCATTGGAc                                                                                                                                          >  3:11362/1‑149 (MQ=255)           ggCGGTGTCTATTCCATCCTCAGCCAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACg                                                                                                                                         <  3:178067/149‑1 (MQ=255)            gCGGTGTCTATTCCATCCTCAGCCAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGt                                                                                                                                        <  6:354284/149‑1 (MQ=255)              ggTGTCTATTCCATCCTCAGCCAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTgg                                                                                                                                      <  7:55918/149‑1 (MQ=255)                  tCTATTCCATCCTCAGCCAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAAt                                                                                                                                  <  1:1904/149‑1 (MQ=255)                    tATTCCATCCTCAGCAAAGAATTCCAGCTTCCGCTAGTCAACCGAATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAAtga                                                                                                                                >  2:37948/1‑149 (MQ=255)                              tCAGCCAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCaaa                                                                                                                      >  6:168408/1‑149 (MQ=255)                                aGCCAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCAATGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACt                                                                                                                    >  5:16279/1‑149 (MQ=255)                                  ccAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTg                                                                                                                   >  1:196362/1‑148 (MQ=255)                                   cAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGa                                                                                                                 <  5:45383/149‑1 (MQ=255)                                   cAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGa                                                                                                                 <  2:270339/149‑1 (MQ=255)                                   cAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGa                                                                                                                 <  2:196362/149‑1 (MQ=255)                                    aaGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGAc                                                                                                                >  8:297597/1‑149 (MQ=255)                                     aGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGAc                                                                                                                >  1:423732/1‑148 (MQ=255)                                      gAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCa                                                                                                              <  8:248132/149‑1 (MQ=255)                                       aaTTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAg                                                                                                             <  7:297597/149‑1 (MQ=255)                                            cAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACGGGACCAGtt                                                                                                           >  2:355484/1‑146 (MQ=255)                                                     cTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACcat                                                                                               >  6:85250/1‑149 (MQ=255)                                                        gTCAACCGCATCATGGTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACcatc                                                                                              <  4:269920/147‑1 (MQ=255)                                                         tCAACCGAATCATGTTCTGTATGCAGCGCCGAAAAAATCTCCCCTAACTGCCCAAGGCGCACTGTTAGCCCACTCCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACcatc                                                                                              <  1:354266/148‑1 (MQ=255)                                                           aaCCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATg                                                                                           >  5:356469/1‑147 (MQ=255)                                                           aaCCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGc                                                                                          <  5:85250/148‑1 (MQ=255)                                                                         ctcGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATgccg                                                                           >  1:378382/1‑149 (MQ=255)                                                                           cGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATATCCACCATCATGCAGATTCCTGATgccgcc                                                                         >  7:233012/1‑149 (MQ=255)                                                                            gATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCt                                                                        >  2:305622/1‑149 (MQ=255)                                                                               gCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCt                                                                                  <  8:279834/136‑1 (MQ=255)                                                                               gCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACCTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCt                                                                                  >  7:279834/1‑136 (MQ=255)                                                                                  gcgcCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGa                                                                  <  8:233012/149‑1 (MQ=255)                                                                                         aaaaaGCTCCCCGAACTGCCCAAGT‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTg                                                           >  7:267080/1‑149 (MQ=255)                                                                                          aaaaGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTgg                                                          <  8:267080/149‑1 (MQ=255)                                                                                               cTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCaa                                                     <  8:333712/149‑1 (MQ=255)                                                                                                  cccGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACTGCTAAGGAGGCACTTGGACGTGGCAATGACCTGACCAAACTGGAACAGTTGATCTCCACCATCATGAAGATTCCTGATGCCGCCTCCCGGAACACCTGGGGCAACTa                                                  >  8:217938/1‑149 (MQ=255)                                                                                                  cccGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACt                                                   >  4:169616/1‑148 (MQ=255)                                                                                                  cccGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACt                                                   <  5:168408/148‑1 (MQ=255)                                                                                                  cccGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACt                                                   <  6:16279/148‑1 (MQ=255)                                                                                                   ccGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGATCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGAAGCCGCCTCCCGGATCAACTGGGGCAACTAc                                                 <  1:37948/149‑1 (MQ=255)                                                                                                   ccGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTAc                                                 <  2:423732/149‑1 (MQ=255)                                                                                                   ccGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGCGGCAACTa                                                  >  3:228451/1‑148 (MQ=255)                                                                                                   ccGAACTGCCCAAGG‑GCACTGTTAGCCC‑AACCATTCTTACGGGTATTGATGCCCTTGGACTTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCTCCTTCATTCAGATTCCTGATTCTGCCTCCCGGATCAACTGGGGCAACTAc                                                 <  4:311309/149‑1 (MQ=255)                                                                                                    cGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGTCCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACa                                                >  5:439236/1‑149 (MQ=255)                                                                                                           cccAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGgcccttgggcagttcggggagctttttgcggcgctgcatcgagaacatgatgcggttgactagcggaagctggaattcttggctgaggatggaatagacaccgccc                                          <  5:47191‑M2/148‑107 (MQ=255)                                                                                                            ccAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGgcccttgggcagttcggggagctttttgcggcgctgcatcgagaacatgatgcggttgactagcggaagctggaattcttggctgaggatggaatagacaccgccc                                          <  2:233777‑M2/147‑107 (MQ=255)                                                                                                             cAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGaa                                       <  6:356469/149‑1 (MQ=255)                                                                                                             cAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCACCTCCCGGATCAACTGGGGCAACTACATGACCCg                                         >  8:107991/1‑147 (MQ=255)                                                                                                              aaGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGgcccttgggcagttcggggagctttttgcggcgctgcatcgagaacatgatgcggttgactagcggaagctggaattcttggctgaggatggaatagacaccgcccaagg                                      >  6:47191‑M2/1‑39 (MQ=255)                                                                                                              aaGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAg                                      >  1:12854/1‑149 (MQ=255)                                                                                                               aGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAgg                                     <  2:129360/149‑1 (MQ=255)                                                                                                                    cACTGTTAGCCC‑CACCATTGTGGAGGGTATGGAGGCCCTTGGACGTGACAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCATGATGCCGCCTCCCGGATCAACTGGGGCAAAAACATGACCCGAAGGGccc                                 >  7:66660/1‑148 (MQ=255)                                                                                                                             ccc‑cACCATTGTGACGGGTATGGAGgcccttgggcagttcggggagctttttgcggcgctgcatcgagaacatgatgcggttgactagcggaagctggaattcttggctgaggatggaatagacaccgcccaaggcggcttccaattcc                        <  2:423786‑M2/149‑125 (MQ=255)                                                                                                                               c‑caccaTTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATTACCTGACCAAACTGGACCAGTTAATCTCCACCATCATGCAGATAACTGATGCCGCCTCCCGGAACAACTCGGGCAACTaa                                                 >  8:45512/1‑121 (MQ=255)                                                                                                                               c‑caccaTTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTAc                                                 <  7:45512/122‑1 (MQ=255)                                                                                                                               c‑caccaTTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTggg                      <  3:173599/149‑1 (MQ=255)                                                                                                                               c‑caccaTTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCATGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGTTCCCGCCCGTggg                      >  1:152124/1‑149 (MQ=255)                                                                                                                               c‑caccaTTGTGACGGGTATGGAGGCCCTTGCACGTGGAAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCAGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTgg                       >  7:399615/1‑148 (MQ=255)                                                                                                                                 caccaTTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTGGGa                     >  6:31556/1‑149 (MQ=255)                                                                                                                                  accaTTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTGGGAt                    >  5:341397/1‑149 (MQ=255)                                                                                                                                             gggTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCGGaac                                      >  2:171950/1‑119 (MQ=255)                                                                                                                                             gggTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAg                                      <  1:171950/120‑1 (MQ=255)                                                                                                                                             gggTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTGGGATCGACACAGACg         >  4:160599/1‑149 (MQ=255)                                                                                                                                             gggTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTGGGATCGACACAGACg         >  4:152638/1‑149 (MQ=255)                                                                                                                                             gggTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAACCGCCACCGCCCTTGGGATCGACACAGACg         >  6:177005/1‑149 (MQ=255)                                                                                                                                                  tGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTGGGATCGACACAGACGGCCTg    <  1:355484/149‑1 (MQ=255)                                                                                                                                                   ggAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGACGGGCCACCGCCCTTGGGATCGAGACAGGCGGCCTgg   >  4:313632/1‑149 (MQ=255)                                                                                                                                                   ggAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTGGGATCGACACAGACGGCCTgg   >  1:175840/1‑149 (MQ=255)                                                                                                                                                    gAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTGGGATCGACACAGACGGCCTGGt  >  5:323036/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                   AGCCGCCTTGGGCGGTGTCTATTCCATCCTCAGCCAAGAATTCCAGCTTCCGCTAGTCAACCGCATCATGTTCTCGATGCAGCGCCGCAAAAAGCTCCCCGAACTGCCCAAGG‑GCACTGTTAGCCC‑CACCATTGTGACGGGTATGGAGGCCCTTGGACGTGGCAATGACCTGACCAAACTGGACCAGTTCATCTCCACCATCATGCAGATTCCTGATGCCGCCTCCCGGATCAACTGGGGCAACTACATGACCCGAAGGGCCACCGCCCTTGGGATCGACACAGACGGCCTGGT  >  NC_002947/2601663‑2601956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.