New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3870425	61 (0.850)	4 (0.060)	3/256	NT	6.2%	coding (494/1428 nt)	PP_3419	sigma‑54 dependent transcriptional regulator/response regulator
	?	NC_002947	= 3870443	63 (0.920)					coding (476/1428 nt)	PP_3419	sigma‑54 dependent transcriptional regulator/response regulator

ACTCGATGAAAGGCCCTTTACTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAGGGTCAGTTTGA  >  NC_002947/3870303‑3870590                                                                                                                                             |                                                                                                                                                    aCTCGATGAAAGGCCCTTTACTGCGCGAACCATCGAATTGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCGTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAgg                                                                                                                                             <  4:294879/149‑1 (MQ=255) aCTCGATGAAAGGCCCTTTACTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAgg                                                                                                                                             <  3:65960/149‑1 (MQ=255)  cTCGATGAAAGGCCCTTTACTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTTGCGCAggg                                                                                                                                            <  2:106705/149‑1 (MQ=255)      aTGAAAGGCCCTTTACTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGtgtg                                                                                                                                        >  8:99268/1‑149 (MQ=255)       tGAAAGGCCCTTTACTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGc                                                                                                                                       <  1:70191/149‑1 (MQ=255)           aGGCCCTTTACTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCtt                                                                                                                                     >  7:61660/1‑147 (MQ=255)            ggCCCTTTACTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAg                                                                                                                                  <  2:110923/149‑1 (MQ=255)             gCCCTTTACTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTTGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAgg                                                                                                                                 <  2:365181/149‑1 (MQ=255)             gCCCTTTACTGCGCGAACCATCGAAATGCAGGACACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAgg                                                                                                                                 >  4:268905/1‑149 (MQ=255)                   tACTGCGCGATCCATCGAAATTCAGGGCACGGGGCAGCTGTTCCTTGCCAGTACCTGTCTCGCCTTCGATCATCACAGGTGGCAGGTCGTCACTGGCCATGAGACGCTCGGCATCGAGCACCTGGCGCAGGTTGTGCTTGAGGGGGAg                                                                                                                            <  6:143778/148‑1 (MQ=255)                   tACTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGa                                                                                                                             <  8:61660/147‑1 (MQ=255)                    aCTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGc                                                                                                                           <  1:115462/148‑1 (MQ=255)                        cgcgAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCAc                                                                                                                      >  7:215418/1‑149 (MQ=255)                        cgcgAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTAACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCAc                                                                                                                      >  8:335460/1‑149 (MQ=255)                               cATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGa                                                                                                                                   <  5:231091/129‑1 (MQ=255)                               cATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGa                                                                                                                                   >  6:231091/1‑129 (MQ=255)                                   gAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGGCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGc                                                                                                           <  8:342893/149‑1 (MQ=255)                                       tGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGAt                                                                                                       >  5:8374/1‑149 (MQ=255)                                          aGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCa                                                                                                     >  3:226643/1‑148 (MQ=255)                                           gggCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGt                                                                                                                               >  3:323797/1‑121 (MQ=255)                                           gggCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGt                                                                                                                               <  4:323797/121‑1 (MQ=255)                                           gggCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCa                                                                                                     >  1:42532/1‑147 (MQ=255)                                            ggCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGc                                                                                                           <  3:352375/140‑1 (MQ=255)                                            ggCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGc                                                                                                           >  4:352375/1‑140 (MQ=255)                                               aCGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCt                                                                                               <  2:343105/149‑1 (MQ=255)                                                     caccaGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAAcc                                                                                         >  3:349063/1‑149 (MQ=255)                                                     caccaGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAAcc                                                                                         >  4:32387/1‑149 (MQ=255)                                                        caGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCg                                                                                       >  8:377592/1‑148 (MQ=255)                                                        caGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCg                                                                                       >  3:106401/1‑148 (MQ=255)                                                          gTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGAc                                                                                    <  5:403340/149‑1 (MQ=255)                                                                 gCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTgc                                                                              <  7:59597/148‑1 (MQ=255)                                                                     gTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGCCTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTc                                                                         >  4:371424/1‑149 (MQ=255)                                                                            tctcGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTcc                                                                  <  3:268905/149‑1 (MQ=255)                                                                                gCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCt                                                                 <  7:169399/146‑1 (MQ=255)                                                                                gCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTgg                                                               <  7:377592/148‑1 (MQ=255)                                                                                gCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTg                                                                <  7:99268/147‑1 (MQ=255)                                                                                  cTTCGGTCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTgg                                                               >  7:393923/1‑146 (MQ=255)                                                                                  cTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAg                                                            <  6:319063/149‑1 (MQ=255)                                                                                   ttCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTc                                                                         <  3:93226/135‑1 (MQ=255)                                                                                   ttCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTc                                                                         >  4:93226/1‑135 (MQ=255)                                                                                   ttCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAg                                                            >  8:69302/1‑148 (MQ=255)                                                                                      gATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAAc                                                         >  7:53137/1‑148 (MQ=255)                                                                                      gATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAAc                                                         >  2:205271/1‑148 (MQ=255)                                                                                      gATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAAc                                                         >  2:211774/1‑148 (MQ=255)                                                                                        tCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAGCGa                                                       >  6:429308/1‑148 (MQ=255)                                                                                            cACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCg                                                  >  3:361197/1‑149 (MQ=255)                                                                                               cGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTgc                                               >  7:147419/1‑149 (MQ=255)                                                                                                       ggTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATg                                       >  5:120456/1‑149 (MQ=255)                                                                                                       ggTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATg                                       <  7:335460/149‑1 (MQ=255)                                                                                                       ggTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATg                                       <  7:69302/149‑1 (MQ=255)                                                                                                        gtcgtcACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATgc                                      >  3:266175/1‑149 (MQ=255)                                                                                                        gtcgtcACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATgc                                      <  8:147419/149‑1 (MQ=255)                                                                                                              aCTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCg                                 <  3:32387/148‑1 (MQ=255)                                                                                                                tGGCCATGCGCCGCTCGGCATCGAGCACCTggcgcatggccagtgacgacctgccaccggtgctgatcgaaggcgagaccggtactggcaaggaactggtggcccgtgccctgcatttcgatggttcgcgcagtaaagggcctttcatc                              <  4:105326‑M2/149‑120 (MQ=255)                                                                                                                   ccATGCGCCGCTCGGCATCGAGCACCTggcgcatggccagtgacgacctgccaccggtgctgatcgaaggcgagaccggtactggcaaggaactggtggcccgtgccctgcatttcgatggttcgcgcagtaaagggcctttcatcgag                           <  2:176437‑M2/149‑123 (MQ=255)                                                                                                                   ccATGCGCCGCTCGGCATCGAGCACCTggcgcatggccagtgacgacctgccaccggtgctgatcgaaggcgagaccggtactggcaaggaactggtggcccgtgccctgcatttcgat                                                         >  1:206963‑M2/1‑27 (MQ=255)                                                                                                                   ccATGCGCCGCTCGGCATCGAGCACCTggcgcatggccagtgacgacctgccaccggtgctgatcgaaggcgagaccggtactggcaaggaactggtggcccgtgccctgcatttcgat                                                         <  2:206963‑M2/119‑93 (MQ=255)                                                                                                                    cATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGc                            >  2:97787/1‑147 (MQ=255)                                                                                                                       gcgcCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAggg                       >  7:88436/1‑149 (MQ=255)                                                                                                                       gcgcCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAggg                       >  7:186394/1‑149 (MQ=255)                                                                                                                        cgccgcTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAggg                       <  6:8374/148‑1 (MQ=255)                                                                                                                        cgccgcTCGGCATCGAGCACCTGGCGCAGGGTGTGCTGGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGc                      <  3:371424/149‑1 (MQ=255)                                                                                                                         gccgcTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGcc                     <  1:205271/149‑1 (MQ=255)                                                                                                                         gccgcTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGcc                     <  4:1684/149‑1 (MQ=255)                                                                                                                         gccgcTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGcc                     <  1:211774/149‑1 (MQ=255)                                                                                                                            gcTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTg                  >  4:197561/1‑149 (MQ=255)                                                                                                                                 gCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCGACCCGGACTTCTGCGCCTCGCGCTCGTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAg             <  8:215418/149‑1 (MQ=255)                                                                                                                                 gCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAg             >  8:363978/1‑149 (MQ=255)                                                                                                                                  cATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAgg            <  2:42532/149‑1 (MQ=255)                                                                                                                                        gCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAGGGTCAGt      <  4:349063/149‑1 (MQ=255)                                                                                                                                         cACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCa                                         >  6:59364/1‑113 (MQ=255)                                                                                                                                         cACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCa                                         <  5:59364/113‑1 (MQ=255)                                                                                                                                         cACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAGGGTCAg       <  4:15083/147‑1 (MQ=255)                                                                                                                                         cACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAGGGTCAg       >  3:15083/1‑147 (MQ=255)                                                                                                                                            cTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAGGGTCAGttt    <  8:27347/147‑1 (MQ=255)                                                                                                                                            cTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAGGGTCAGttt    >  2:201777/1‑147 (MQ=255)                                                                                                                                            cTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAGGGTCAGTTTGa  >  7:27347/1‑149 (MQ=255)                                                                                                                                             |                                                                                                                                                    ACTCGATGAAAGGCCCTTTACTGCGCGAACCATCGAAATGCAGGGCACGGGCCACCAGTTCCTTGCCAGTACCGGTCTCGCCTTCGATCAGCACCGGTGGCAGGTCGTCACTGGCCATGCGCCGCTCGGCATCGAGCACCTGGCGCAGGGTGTGCTTGAGGGTGAGCATCACCGGCGACTCGCCGATCAAAGCCTGCAACCCGGACTTCTGCGCCTCGCGCTCCTGGTAGAACGACAGCGTGCGCTCCATGCGCTCGGTAGCCAGGGCCTTGTCCAGGGTCAGTTTGA  >  NC_002947/3870303‑3870590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.