New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3895238	56 (0.780)	3 (0.040)	3/254	NT	5.6%	intergenic (‑180/‑112)	yegH/PP_3438	putative transporter/membrane protein
	?	NC_002947	= 3895264	48 (0.710)					intergenic (‑206/‑86)	yegH/PP_3438	putative transporter/membrane protein

GGCTCCGCGAAGGTGCTCATATAGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCGGCCTCGATCTCCCCCGGCCCGG  >  NC_002947/3895128‑3895410                                                                                                                                         |                                                                                                                                                   ggCTCCGCGAAGGTGCTCATATAGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTTCATCGCCATTAGCCCTGCAGGCGAGGGTTGTgcg                                                                                                                                          >  5:164310/1‑147 (MQ=255) ggCTCCGCGAAGGTGCTCATATAGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCa                                                                                                                                        <  7:187735/149‑1 (MQ=255) ggCGCCGCGAAGGTGCTCATATAGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCa                                                                                                                                        <  8:125686/149‑1 (MQ=255) ggCGCCGCGAAGGGGCTCATATAGACCTTGATAACAAAATGGGAGCCCGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCa                                                                                                                                        <  6:27440/149‑1 (MQ=255) gcccccGCGAAGGTGCTCATATAGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCa                                                                                                                                        <  1:36800/145‑1 (MQ=255) gccTCCGCGAAGGTGCTCATATAGACCTTGATAACAAATTGTGAGATCGTTACTAGAAGCACACCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGTTTGTGCGCa                                                                                                                                        <  1:361175/147‑1 (MQ=255)    tCCGCGAAGGTGCTCATATAGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCggg                                                                                                                                                 >  7:176484‑M2/1‑134 (MQ=255)    tCCGCGAAGGTGCTCATATAGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCggg                                                                                                                                                 <  8:176484‑M2/137‑4 (MQ=255)    tCCGCGAAGGTGCTCATATAGACCTTCATAACAAATAGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACAATTACAAAACCAGTAACAACCCTGCATCGACATTAGCCCTGCAGGCGCGGGTTCTGCGCacg                                                                                                                                      >  7:54805/1‑146 (MQ=255)            ggTGCTCATATAGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGt                                                                                                                             <  1:356711/149‑1 (MQ=255)                 tCATATAGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCaa                                                                                                                         >  5:86039/1‑148 (MQ=255)                     ataGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACa                                                                                                                     >  8:324024/1‑148 (MQ=255)                            ttGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACg                                                                                                             >  7:22489/1‑149 (MQ=255)                               aTAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACgc                                                                                                            >  7:200246/1‑147 (MQ=255)                                tAACAAATTGGGAGAACGATATTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCa                                                                                                                          >  4:417298/1‑132 (MQ=255)                                tAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACgcca                                                                                                          <  7:175330/148‑1 (MQ=255)                                 aaCAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACgccagc                                                                                                        >  1:425979/1‑149 (MQ=255)                                  aCAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACgccagc                                                                                                        <  2:31422/148‑1 (MQ=255)                                   cAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACgccagcca                                                                                                      >  3:94472/1‑149 (MQ=255)                                         gggAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGa                                                                                                 <  8:200246/148‑1 (MQ=255)                                          ggAGAACGTTACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAg                                                                                                <  7:185906/148‑1 (MQ=255)                                           tagaACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGa                                                                                              <  7:378072/148‑1 (MQ=255)                                            agaACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGa                                                                                              >  2:405692/1‑148 (MQ=255)                                               aCGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAg                                                                                          <  7:296647/149‑1 (MQ=255)                                                  aTACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGc                                                                                        >  7:77344/1‑148 (MQ=255)                                                      tacAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAgg                                                                                               >  8:151058/1‑137 (MQ=255)                                                      tacAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAgg                                                                                               <  7:151058/137‑1 (MQ=255)                                                      tacAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTccc                                                                                   >  3:214023/1‑149 (MQ=255)                                                        cAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATATATCAGAACGCCAGCCACGCGAGGATAAGGCCTcccc                                                                                  <  1:70548/148‑1 (MQ=255)                                                        cAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTcccc                                                                                  >  1:290566/1‑148 (MQ=255)                                                         aaGCACAGCAGGTTTCTGTAGTCGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCaa                                                                                >  7:64200/1‑149 (MQ=255)                                                             acaGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAg                                                                                                <  5:262373/129‑1 (MQ=255)                                                             acaGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAg                                                                                                >  6:262373/1‑129 (MQ=255)                                                                 cagGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCgg                                                                        <  2:425979/149‑1 (MQ=255)                                                                       tCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCtt                                                                   <  7:333406/148‑1 (MQ=255)                                                                        ctctagtagCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCTCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTc                                                                  <  4:62840/145‑1 (MQ=255)                                                                         tGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCt                                                                >  2:234836/1‑149 (MQ=255)                                                                           tagtagCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTc                                                               <  8:64200/148‑1 (MQ=255)                                                                            agtagCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCa                                                              <  2:290566/148‑1 (MQ=255)                                                                               agCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGa                                                           <  3:417425/148‑1 (MQ=255)                                                                               agCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAg                                                          >  5:219077/1‑149 (MQ=255)                                                                                gcgcAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGc                                                         <  8:22489/149‑1 (MQ=255)                                                                                      aaCTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATAc                                                   <  4:214023/149‑1 (MQ=255)                                                                                           ttACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAAc                                                                               >  1:313393/1‑116 (MQ=255)                                                                                           ttACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAAc                                                                               <  2:313393/116‑1 (MQ=255)                                                                                             aCAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCa                                            >  2:348250/1‑149 (MQ=255)                                                                                             aCAAAACCTGTAACAACCCTCCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTcc                                             <  8:54805/148‑1 (MQ=255)                                                                                              cAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATTCCTGTCCAt                                           >  5:351755/1‑149 (MQ=255)                                                                                              cAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCAt                                           >  2:21180/1‑149 (MQ=255)                                                                                                     tGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCgggttgttacaggttttgtaatagttttgcgatactacagaaacctgctgtgcttgtagtatcgttctcccaatttgttatcaaggtctatatgagcaccttcgcggctcga                                    <  2:281136‑M2/149‑113 (MQ=255)                                                                                                     tGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGgccgcc                                    >  5:382569/1‑149 (MQ=255)                                                                                                      gTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCgggttgttacaggttttgtaatagttttgcgctactacagaaacctgctgtgcttgtagtatcgttctcccaatttgttatcaaggtctatatgagcaccttcgcggagc                                      >  4:70461‑M2/1‑36 (MQ=255)                                                                                                      gTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCgggttgttacaggttttgtaatagttttgcgctactacagaaacctgctgtgcttgtagtatcgttctcccaatttgttatcaaggtctatatgagcaccttcgcggagc                                      <  3:70461‑M2/146‑111 (MQ=255)                                                                                                            acCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGccc                             <  8:29611/149‑1 (MQ=255)                                                                                                             cccTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTAAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCt                            >  8:233785/1‑149 (MQ=255)                                                                                                                  cATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCg                        <  6:86039/148‑1 (MQ=255)                                                                                                                   aTCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCGGc                      >  5:380545/1‑149 (MQ=255)                                                                                                                    tCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCGGcc                     <  2:43878/149‑1 (MQ=255)                                                                                                                          ttAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCGGCCTCGAtc               >  6:183389/1‑149 (MQ=255)                                                                                                                                   cAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCGGCCTCGATCTCCctcggc      <  1:405692/149‑1 (MQ=255)                                                                                                                                      gcgcGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCGGCCTCGATCTCCcccggcccg   >  8:17209/1‑149 (MQ=255)                                                                                                                                        gcgGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCGGCCTc                   <  3:211857/131‑1 (MQ=255)                                                                                                                                        gcgGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCGGCCTc                   >  4:211857/1‑131 (MQ=255)                                                                                                                                        gcgGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCGGCCTCGATCTCCcccggcccgg  >  3:223191/1‑148 (MQ=255)                                                                                                                                         |                                                                                                                                                   GGCTCCGCGAAGGTGCTCATATAGACCTTGATAACAAATTGGGAGAACGATACTACAAGCACAGCAGGTTTCTGTAGTAGCGCAAAACTATTACAAAACCTGTAACAACCCTGCATCGCCATTAGCCCTGCAGGCGCGGGTTGTGCGCAGGTACTTTTGTTCAATACATCAGAACGCCAGCCACGCGAGGATAAGGCCTCCCCAACCACGCGGATCTTCCTCATGAGCCTATACCTGTCCATGGCCGCCTTCGCCCTTGCGGCCTCGATCTCCCCCGGCCCGG  >  NC_002947/3895128‑3895410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.