New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 571724070 (0.980)4 (0.060) 4/258 NT 6.2% intergenic (+40/‑62) PP_5019/PP_5020 16S rRNA (uracil(1498)‑N(3))‑methyltransferase/methyl‑accepting chemotaxis protein
?NC_002947 = 5717290 54 (0.780)intergenic (+90/‑12) PP_5019/PP_5020 16S rRNA (uracil(1498)‑N(3))‑methyltransferase/methyl‑accepting chemotaxis protein

GTGATCGCATCTTGCGGGTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGGCACGGCATGGACAGCAT  >  NC_002947/5717142‑5717429
                                                                                                                                                    |                                                                                                                                           
gTGATCGCATCTTGCGGGTGGAGACCGGCGGCACCGCGCTGCGTTCGCGTAGTTTCTGTCACCAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGccgccg                                                                                                                                             <  3:325088/149‑1 (MQ=255)
 tGATCGCATCTTGCGGGTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGg                                                                                                                                            >  4:152544‑M2/1‑148 (MQ=255)
  gATCGCATCTTGCGGGTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGgg                                                                                                                                           >  8:373804‑M2/1‑147 (MQ=255)
   aTCGCATCTTGCGGGTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGgg                                                                                                                                           >  1:418169‑M2/1‑146 (MQ=255)
   aTCGCATCTTGCGGGTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGgg                                                                                                                                           >  7:110675‑M2/1‑146 (MQ=255)
    tCGCATCTTGCGGGTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGggga                                                                                                                                         >  3:148749‑M2/1‑145 (MQ=255)
      gCATCTTGCGGGTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGt                                                                                                                                       >  4:180430/1‑149 (MQ=255)
       cATCTTGCGGGTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTc                                                                                                                                      >  3:261679/1‑149 (MQ=255)
               gggTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGGCACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGt                                                                                                                              >  8:87205/1‑149 (MQ=255)
                 gTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGGTGCCAAGCCGCCGGGGAGTCGAACATGTAt                                                                                                                            <  6:265307/149‑1 (MQ=255)
                 gTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTAt                                                                                                                            >  5:392601/1‑149 (MQ=255)
                         cgccgTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGt                                                                                                                     >  5:256120/1‑148 (MQ=255)
                           ccgTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAg                                                                                                                  <  4:261679/149‑1 (MQ=255)
                            cgTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGc                                                                                                                 <  7:389294/149‑1 (MQ=255)
                                  cgcgCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATc                                                                                                           >  3:173936/1‑149 (MQ=255)
                                  cgcgCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGACAAGCCGCCGGGGAGTCGAAAATGTATCAATGGTTAGCCCAATc                                                                                                           >  4:414941/1‑149 (MQ=255)
                                     gctgctTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCt                                                                                                        <  8:75095/149‑1 (MQ=255)
                                      ctgctTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTg                                                                                                       <  6:178505/149‑1 (MQ=255)
                                            tCGCGTATTTTCTGGCACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCa                                                                                                   <  7:87205/147‑1 (MQ=255)
                                            tCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCaa                                                                                                  <  5:209600/148‑1 (MQ=255)
                                              gcgTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAAtg                                                                                                <  5:348833/148‑1 (MQ=255)
                                                        tGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAAt                                                                                     >  5:379722/1‑149 (MQ=255)
                                                          acacAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATc                                                                                    <  5:39044/148‑1 (MQ=255)
                                                          acacAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGACCAATCGCTGGGCAATGTGAGCGTCAATCg                                                                                   <  1:38700/149‑1 (MQ=255)
                                                              aaaCACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTTCTGCCAAGCCGCCGCGGAGTCGAACATGTATCAATTGTTAGCACAATCGCTGGGCAATGTGAGCGTCAATCCCaaa                                                                               >  4:237256/1‑149 (MQ=255)
                                                              aaaCACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCaaa                                                                               >  6:410478/1‑149 (MQ=255)
                                                                   ccccTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTggg                                                                          <  2:302823/149‑1 (MQ=255)
                                                                      cttcttCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCt                                                                       >  1:183923/1‑149 (MQ=255)
                                                                         cttcGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTgg                                                                     <  2:108935/148‑1 (MQ=255)
                                                                          ttcGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGt                                                                   >  6:262641/1‑149 (MQ=255)
                                                                             gCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAGACTGGGGCTGGGTTTc                                                                >  6:150417/1‑149 (MQ=255)
                                                                             gCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTc                                                                >  4:349942/1‑149 (MQ=255)
                                                                                cATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGc                                                             <  5:146418/149‑1 (MQ=255)
                                                                                     aGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCACGCCGCGGGGGAGTCGAACTTGTATCAAGGGTTACCCCAATCTCGGGGCAATGGGCGCGTCAATCGCAACGTGGGGCTGGGTTTCAGcagggt                                                        >  8:150297/1‑144 (MQ=255)
                                                                                      gTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTg                                                       >  4:94414/1‑149 (MQ=255)
                                                                                      gTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAAATATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTg                                                       >  4:87822/1‑149 (MQ=255)
                                                                                       tttCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGc                                                      <  6:392601/149‑1 (MQ=255)
                                                                                         tCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGgggagggggaaacttgatgggcgaagaaggggtgtttgtgtcagaaaatacgcgaaagcagcgcggtgacggcggtctccacccgcaa                                                     >  8:387588‑M2/1‑60 (MQ=255)
                                                                                         tCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGgggagggggaaacttgatgggcgaagaaggggtgtttgtgtcagaaaatacgcgaaagcagcgcggtgacggcggtctccacccgc                                                       <  7:387588‑M2/146‑87 (MQ=255)
                                                                                         tCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGGCCTTCGCAATCTGGGGCTGGGTTTCGGCCTGGTGCtt                                                    >  3:81780/1‑149 (MQ=255)
                                                                                           ccccTCCCGGGCCGCTGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCt                                                  >  2:216971/1‑149 (MQ=255)
                                                                                           ccccTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGTGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTc                                                   <  1:325420/148‑1 (MQ=255)
                                                                                           ccccTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCt                                                  >  1:241244/1‑149 (MQ=255)
                                                                                             ccTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGgggagggggaaacttgatgggcgaagaaggggtgtttgtgtcagaaaatacgcgaaagcagcgcggtgacggcggtctccacccgcaagatgc                                                <  7:154649‑M2/149‑94 (MQ=255)
                                                                                             ccTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGt                                                >  6:298796/1‑149 (MQ=255)
                                                                                              cTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGtt                                               >  2:425062/1‑149 (MQ=255)
                                                                                                 ccGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGgggagggggaaacttgatgggcgaagaaggggtgtttgtgtcagaaaatacgcgaaagcagcgcggtgacggcggtctccacccgcaagatgcga                                              >  8:154649‑M2/1‑52 (MQ=255)
                                                                                                 ccGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGAc                                            <  2:241244/149‑1 (MQ=255)
                                                                                                      ccGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTgg                                       <  3:237256/149‑1 (MQ=255)
                                                                                                       cGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGc                                      <  2:183923/149‑1 (MQ=255)
                                                                                                              cTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGGGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTAcc                               >  8:409290/1‑149 (MQ=255)
                                                                                                              cTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTAcc                               <  4:26358/149‑1 (MQ=255)
                                                                                                              cTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTAcc                               <  3:245668/149‑1 (MQ=255)
                                                                                                               ttGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGAGCTTGGCGATTAccc                              >  7:360034/1‑149 (MQ=255)
                                                                                                                  gCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGa                           <  5:298796/149‑1 (MQ=255)
                                                                                                                     acaatacaatTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCg                        >  2:103792/1‑149 (MQ=255)
                                                                                                                       aatacaatTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGc                      <  5:262641/149‑1 (MQ=255)
                                                                                                                            aatTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGGCa                 >  5:200310/1‑149 (MQ=255)
                                                                                                                             attattTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGGCAc                >  3:332870/1‑149 (MQ=255)
                                                                                                                                   tgtgCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGGCACGGCATg          >  1:213039/1‑149 (MQ=255)
                                                                                                                                    gtgCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGGCACGGCATg          <  3:87822/148‑1 (MQ=255)
                                                                                                                                     tgctgcCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGGCACGGCATGGa        >  4:49835/1‑149 (MQ=255)
                                                                                                                                       ctgcCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACGTTGGCGATTACCCTGACCGGCTGGCACGGCATGGACa      >  8:291723/1‑149 (MQ=255)
                                                                                                                                       ctgcCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGGCACGGCATGGa        >  1:336411/1‑147 (MQ=255)
                                                                                                                                          ccAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGGCACGGCATGGACAGca   >  5:84762/1‑149 (MQ=255)
                                                                                                                                            aaGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGGCACGGCATGGACAGcat  >  6:270867/1‑148 (MQ=255)
                                                                                                                                                cgccgGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCATGACCGGCTGGCACGGCATg          >  3:402548/1‑136 (MQ=255)
                                                                                                                                                cgccgGGGAGTCGAACATGTATCAATGGTTAGACCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGTCACGGCATg          <  4:402548/136‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                           
GTGATCGCATCTTGCGGGTGGAGACCGCCGTCACCGCGCTGCTTTCGCGTATTTTCTGACACAAACACCCCTTCTTCGCCCATCAAGTTTCCCCCTCCCGGGCCGATGGCCTTGGCAACAATACAATTATTTGTGCTGCCAAGCCGCCGGGGAGTCGAACATGTATCAATGGTTAGCCCAATCGCTGGGCAATGTGAGCGTCAATCGCAAACTGGGGCTGGGTTTCGGCCTGGTGCTTCTGTTGACCTTGGCGATTACCCTGACCGGCTGGCACGGCATGGACAGCAT  >  NC_002947/5717142‑5717429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.