New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6047967	57 (0.800)	4 (0.060)	4/256	NT	6.0%	coding (442/1050 nt)	PP_5300	LysR family transcriptional regulator
	?	NC_002947	= 6048039	72 (1.050)					coding (514/1050 nt)	PP_5300	LysR family transcriptional regulator

CACCGCCCAGGCCTTGGCCGAGCAGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGTTGGCCGCAAC  >  NC_002947/6047891‑6048182                                                                                                                                                     |                                                                                                                                                cacCGCCCAGGCCTTGGCCGAGCAGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCgg                                                                                                                                                 >  2:88934/1‑149 (MQ=255)      cccAGGCCTTGGCCGAGCAGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCGCAGCCTGTTGCTGCCGGcactg                                                                                                                                            >  4:307996‑M2/1‑144 (MQ=255)       ccAGGCCTTGGCCGAGCAGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGcactgg                                                                                                                                           >  2:124526‑M2/1‑143 (MQ=255)           gCCTTGGCCGAGCAGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCTGCACGGTGCGCCTTACCTGCACGGAGGCGTTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGa                                                                                                                                       <  5:772/149‑1 (MQ=255)             cTTGGCCGAGCAGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGt                                                                                                                                     >  7:295011/1‑149 (MQ=255)                ggCCGAGCAGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGtt                                                                                                                                    <  3:46433/147‑1 (MQ=255)                 gCCGAGCAGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCAt                                                                                                                                 <  4:140274/149‑1 (MQ=255)                 gCCGAGCAGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCAt                                                                                                                                 <  3:382908/149‑1 (MQ=255)                  ccGAGCAGGCCGAACGTGCGGAGGAGGCGCTGGAAGCAGCGCGCATTGCCATGACCTGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGTAGGCGGTGATGCACAGCCTGTTGCTGCCTGCACTGGCCGAGTTCAt                                                                                                                                 <  3:285898/148‑1 (MQ=255)                        aGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAAc                                                                                                                          >  6:294777/1‑149 (MQ=255)                            cGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTAcc                                                                                                                      >  5:18506/1‑149 (MQ=255)                                  tGCCGAGCAGGCGCTGGAAGCAGCGCGCATAGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCt                                                                                                                >  7:55241/1‑149 (MQ=255)                                   gCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCtt                                                                                                               >  3:338495/1‑149 (MQ=255)                                   gCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCtt                                                                                                               >  1:298666/1‑149 (MQ=255)                                    ccGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTg                                                                                                              >  3:283553/1‑149 (MQ=255)                                    ccGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGCCCGAGTTCATGTCCAACTACCCGGCCTTg                                                                                                              >  3:210319/1‑149 (MQ=255)                                     cGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGt                                                                                                             <  4:338495/149‑1 (MQ=255)                                          aGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGCCGCTg                                                                                                        <  5:11606/149‑1 (MQ=255)                                               cTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCCCTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGAt                                                                                                   >  2:176022/1‑149 (MQ=255)                                                  gAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGc                                                                                                                  >  3:357544/1‑131 (MQ=255)                                                  gAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGc                                                                                                                  <  4:357544/131‑1 (MQ=255)                                                            gcATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCaa                                                                                       >  7:80760/1‑148 (MQ=255)                                                            gcATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAac                                                                                      <  8:80760/149‑1 (MQ=255)                                                                  ccATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCGCCTCCAACACCTTc                                                                                >  2:233601/1‑149 (MQ=255)                                                                    aTGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGAt                                                                                                   <  2:351646/128‑1 (MQ=255)                                                                    aTGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGAt                                                                                                   >  1:351646/1‑128 (MQ=255)                                                                     tGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGTACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGcactggtcatggcaatgcgcgctgcttccagcgcctgctcggcac                                                                                                    <  6:426637‑M2/126‑46 (MQ=255)                                                                     tGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGTACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGcactggtcatggcaatgcgcgctgcttccagcgcctgctcggcac                                                                                                    >  5:426637‑M2/1‑81 (MQ=255)                                                                      gACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGcactggtcatggcaatgcgcgctgcttccagcgcctgctcggcacgttcggcctgctcggccaaggcct                                                                            <  8:360150‑M2/149‑70 (MQ=255)                                                                         cAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTTGCCAAcc                                                                         <  8:281215/149‑1 (MQ=255)                                                                           gTGGCCAGCAGGTGGTAAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACACCCTCTTGCTGCCGCCACTGGCCGAGTTCATGTCCAACTACCCGGCCTAGTCCCTGGAGATGGGCACCTCCACCACCTTCGCCAACCt                                                                        >  2:377462/1‑148 (MQ=255)                                                                                gAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTTCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCg                                                                  <  8:295011/149‑1 (MQ=255)                                                                                gAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATgg                                                                                                 <  8:286235/118‑1 (MQ=255)                                                                                gAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATgg                                                                                                 >  7:286235/1‑118 (MQ=255)                                                                                    aGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGgcgc                                                              <  7:145120/149‑1 (MQ=255)                                                                                    aGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGgcgc                                                              >  8:256700/1‑149 (MQ=255)                                                                                       tggtCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCACCACCTTCGCCAACCTCAGCCGGCGCGAc                                                           >  4:60753/1‑149 (MQ=255)                                                                                          tCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGcc                                                        >  5:100634/1‑149 (MQ=255)                                                                                            aGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGa                                                      >  1:418980/1‑149 (MQ=255)                                                                                            aGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGa                                                      >  2:179013/1‑149 (MQ=255)                                                                                             gCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGa                                                      >  2:419747/1‑148 (MQ=255)                                                                                                     gTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCt                                             >  1:391712/1‑149 (MQ=255)                                                                                                         gcCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTgcgc                                         <  1:21093/149‑1 (MQ=255)                                                                                                          ccTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGcc                                        >  7:304534/1‑149 (MQ=255)                                                                                                          ccTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGcc                                        <  1:419747/149‑1 (MQ=255)                                                                                                           cTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGcactggtcatggcaatgcgcgctgcttccagcgcctgctcggcacgttcggcctgctcggccaaggcctgggcggtgtcagtcggcagatagccctttcggctctt                                       >  7:360150‑M2/1‑43 (MQ=255)                                                                                                            ttACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCt                                       >  8:264018/1‑148 (MQ=255)                                                                                                              aCCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGa                                     <  6:18506/148‑1 (MQ=255)                                                                                                                 tGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCaa                                 >  2:140103/1‑149 (MQ=255)                                                                                                                   cACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGTGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAac                                <  8:55241/148‑1 (MQ=255)                                                                                                                   cACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCaa                                 <  8:304534/147‑1 (MQ=255)                                                                                                                    aCGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAacac                              <  3:65497/149‑1 (MQ=255)                                                                                                                         ggCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGATTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCa                                                                      <  7:98307/104‑1 (MQ=255)                                                                                                                         ggCGGTGATGAACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCa                                                                      >  8:98307/1‑104 (MQ=255)                                                                                                                           cGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCg                       <  4:283553/149‑1 (MQ=255)                                                                                                                            ggTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACCCCTCCg                       >  7:155845/1‑148 (MQ=255)                                                                                                                               gATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAg                    >  4:427626/1‑148 (MQ=255)                                                                                                                                aTGCAGAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTAGCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGc                   <  4:210319/148‑1 (MQ=255)                                                                                                                                aTGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGCCATCGCCCTGCGCCTGACCAACACACCTCCGGAGCa                  >  6:361151/1‑149 (MQ=255)                                                                                                                                 tGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCAc                 <  2:280728/149‑1 (MQ=255)                                                                                                                                 tGCACAGCCTGTTGCTGCCGGCACTGGCCGAGCTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCAc                 <  4:306276/149‑1 (MQ=255)                                                                                                                                  gCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCAcc                >  1:438235/1‑149 (MQ=255)                                                                                                                                   cacaGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGgc                                                                >  3:322781/1‑100 (MQ=255)                                                                                                                                   cacaGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGgc                                                                <  4:322781/100‑1 (MQ=255)                                                                                                                                   cacaGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCAcc                <  1:140103/148‑1 (MQ=255)                                                                                                                                   cacaGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCAcc                <  2:438235/148‑1 (MQ=255)                                                                                                                                   cacaGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCt               >  3:422337/1‑149 (MQ=255)                                                                                                                                     caGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCGCCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTgg             <  1:233601/149‑1 (MQ=255)                                                                                                                                     caGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCg                       <  5:209587/139‑1 (MQ=255)                                                                                                                                     caGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCg                       >  6:209587/1‑139 (MQ=255)                                                                                                                                     caGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTgg             >  6:427250/1‑149 (MQ=255)                                                                                                                                       gCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGtt           <  5:294777/149‑1 (MQ=255)                                                                                                                                       gCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGtt           <  6:100634/149‑1 (MQ=255)                                                                                                                                        ccTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGTTg          >  6:3227/1‑149 (MQ=255)                                                                                                                                            ttGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGTTGGcc       <  3:20862/148‑1 (MQ=255)                                                                                                                                            ttGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGTTGGcc       <  2:391712/148‑1 (MQ=255)                                                                                                                                            ttGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGTTGGc        <  1:179013/147‑1 (MQ=255)                                                                                                                                            ttGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGTTGGCCg      >  5:175321/1‑149 (MQ=255)                                                                                                                                                tgcCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGTTGGCCGCAAc  >  6:443886/1‑149 (MQ=255)                                                                                                                                                tgcCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGTTGGCCGCAAc  >  2:263496/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                CACCGCCCAGGCCTTGGCCGAGCAGGCCGAACGTGCCGAGCAGGCGCTGGAAGCAGCGCGCATTGCCATGACCAGTGGCGAGCAGGTGGTCAGCGGCACGGTGCGCCTTACCTGCACGGAGGCGGTGATGCACAGCCTGTTGCTGCCGGCACTGGCCGAGTTCATGTCCAACTACCCGGCCTTGTCGCTGGAGATGGGCACCTCCAACACCTTCGCCAACCTCAGCCGGCGCGACGCCGACATCGCCCTGCGCCTGACCAACACACCTCCGGAGCACCTGGTTGGCCGCAAC  >  NC_002947/6047891‑6048182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.