New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4601529 =	55 (0.960)	3 (0.060)	3/266	5.7	5.4%	coding (363/633 nt)	PP_4073	hypothetical protein
	?	NC_002947	4601591 =	54 (1.000)					coding (301/633 nt)	PP_4073	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATCCATGAGACGGGGCGGGCGCCCGAGGACTTGAGGTTTCGCCTCCGCTCTGAAGAAGGCGGGCTCCTGATCTCTGCACCTGCGATTGCTTCAGTTGCACCGCACCCCTACCTGATCATCAGCTGCGTGCAGAACATCTCGAGGTTGCAACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4601682‑4601529 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaactgAAGCAATCGCAGGTGCAGAGATCAGGAGCCCGCCTTCTTCAGAGCGGAG‑GCGAAACCTCAAGTCCTCGGGCGCCCGCCCCGTCTCATGGATCAATACGCGACGCACCGTGGGTGCCTCCAGCTCCTGCGCTGACCACTGTCGCTGC  >  NC_002947/4601591‑4601736                                                                                                                                                                                                                                                                                                               GATCCATGAGACGGGGCGGGCGCCCGAGGACTTGAGGTTTCGCCTCCGCTCTGAAGAAGGCGGGCTCCTGATCTCTGCACCTGCGATTGCTTCAGTTGCACCGCACCCCTACCTGATCATCAGCTGCGTGCAGAACATCTCGAGGTT                                                                                                                                                            <  8:176121/147‑1    CCATGAGACGGGGCGGGCGCCCGAGGACTTGAGGTTTCGCCTCCGCTCTGAAGAAGGCGGGCTCCTGATCTCTGCACCTGCGATTGCTTCAGTTGCACCGCACCCCTACCTGATCATCAGCTGCGTGCAGAACATCTCGAGGTTGCA                                                                                                                                                         >  3:271727/1‑147    CCATGAGACGGGGCGGGCGCCCGAGGACTTGAGGTTTCGCCTCCGCTCTGAAGAAGGCGGGCTCCTGATCTCTGCACCTGCGATTGCTTCAGTTGCACCGCACCCCTACCTGATCATCAGCTGCGTGCAGAACATCTCGAGGTT                                                                                                                                                            >  1:195209/1‑144    CCATGAGACGGGGCGGGCGCCCGAGGACTTGAGGTTTCGCCTCCGCTCTGAAGAAGGCGGGCTCCTGATCTCTGCACCTGCGATTGCTTCAGTTGCACCGCACCCCTACCTGATCATCAGCTGCGTGCAGAACATCTCGAGGTT                                                                                                                                                            <  2:195209/144‑1                                                                                        TGCTTCAGTTGCACCGCACCCCTACCTGATCATCAGCTGCGTGCAGAACATCTCGAGGTTGCAACTGAAGCAATCGCAGGTGCAGAGATCAGGAGCCCGCCTTCTTCAGAGCGGAG‑GCGAAACCTCAAGTCCTCGGGCGCCCGCCCCG                                                                   >  4:677/1‑148                                                                                                 TGCACCGCACCCCTACCTGATCATCAGCTGCGTGCAGAACATCTCGAGGTTGCAACTGAAGCAATCGCAGGTGCAGAGATCAGGAGCC                                                                                                                       >  5:74984/1‑88                                                                                                 TGCACCGCACCCCTACCTGATCATCAGCTGCGTGCAGAACATCTCGAGGTTGCAACTGAAGCAATCGCAGGTGCAGAGATCAGGAGCC                                                                                                                       <  6:74984/88‑1                                                                                                                                                   TGCAACTGAAGCAATCGCAGGTGCAGAGATCAGGAGCCCGCCTTCTTCAGAGCGGAG‑GCGAAACCTCAAGTCCTCGGGCGCCCGCCCCGTCTCATGGATCAATACGCGACGCACCGTGGGTGCCTCCAGCTCCTGCGCTGACCACTGT        >  2:289187/1‑148                                                                                                                                                   TGCAACTGAAGCAATCGCAGGTGCAGAGATCAGGAGCCCGCCTTCTTCAGAGCGGAG‑GCGAAACCTCAAGTCCTCGGGCGCCCGCCCCGTCTCATGGATCAATACGCGACGCACCGTGGGTGCCTCCAGCTCCTGCGCTGACCACTG         <  6:325970/147‑1                                                                                                                                                      AACTGAAGCAATCGCAGGTTCAGAGATCAGGAGCCCGCCTTCTTCAGAGCGGAG‑GCGAAACCTCAAGTCCTCGGGCGCCCGCCCCGTCTCATGGACCAATACGCGACGCACCGTGGGTGCCTCCAGCTCCTGCGCTGACCACTGTC       <  5:242848/146‑1                                                                                                                                                      AACTGAAGCAATCGCAGGTGCAGAGATCAGGAGCCCGCCTTCTTCAGAGCGGAG‑GCGAAACCTCAAGTCCTCGGGCGCCCGCCCCGTCTCATGGATCAATACGCGACGCACCGTGGGTGCCTCCAGCTCCTGCGCTGACCACTGTCGC     <  4:199182/148‑1                                                                                                                                                        CTGAAGCAATCGCAGGGGCAGAGATCAGGAGCCCGCCTTCTTCAGAGCGGAG‑GCGAAACCTCAAGTCCTCGGGCGCCCGCCCCGTCTCATGGATCAATACGCGACGCACCGTGGGTGCCTCCAGCTCCTGCGCTGACCACTGTCGCTG   <  2:262923/148‑1                                                                                                                                                          GAAGCAATCGCAGGTGCAGAGATCAGGAGCCCGCCTTCTTCAGAGCGGAGAGCGAAACCTCAAGTCCTCGGGCGCCCGCCCCGTCTCATGGATCAATACGCGACGCACCGTGGGTGCCTCCAGCTCCTGCGCTGACCACTGTCGCTGC  >  1:81031/1‑148                                                                                                                                                                                                                                                                                                               GATCCATGAGACGGGGCGGGCGCCCGAGGACTTGAGGTTTCGCCTCCGCTCTGAAGAAGGCGGGCTCCTGATCTCTGCACCTGCGATTGCTTCAGTTGCACCGCACCCCTACCTGATCATCAGCTGCGTGCAGAACATCTCGAGGTTGCAACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4601682‑4601529 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaactgAAGCAATCGCAGGTGCAGAGATCAGGAGCCCGCCTTCTTCAGAGCGGAG‑GCGAAACCTCAAGTCCTCGGGCGCCCGCCCCGTCTCATGGATCAATACGCGACGCACCGTGGGTGCCTCCAGCTCCTGCGCTGACCACTGTCGCTGC  >  NC_002947/4601591‑4601736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.