New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3708260	38 (0.660)	3 (0.060)	3/266	5.7	7.0%	coding (614/1563 nt)	actP‑III	acetate permease
	?	NC_002947	= 3708293	44 (0.810)					coding (581/1563 nt)	actP‑III	acetate permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCATCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAG  >  NC_002947/3708114‑3708405                                                                                                                                                   |                                                                                                                                                   gcATCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑c                                                                                                                                                  <  3:6053/148‑1 (MQ=255)              cGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCAAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGcc                                                                                                                                      >  1:58819/1‑147 (MQ=255)                     ccAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCCaattcat                                                                                                                              >  7:230769/1‑143 (MQ=255)                      cAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCt                                                                                                                              <  6:251941/147‑1 (MQ=255)                         cGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAg                                                                                                                          <  7:99417/148‑1 (MQ=255)                            tGCCGAACATCATGCCCAAACCGAGGGAAATGCCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTCGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCAc                                                                                                                       <  8:52701/148‑1 (MQ=255)                              ccGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCa                                                                                                                     >  4:98309/1‑148 (MQ=255)                                            cAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGaaa                                                                                                       >  4:160125/1‑148 (MQ=255)                                              aaCCGAGGGGAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACt                                                                                                     <  4:228215/148‑1 (MQ=255)                                                 cGAGGGAAATGGCGTCCACCGGGTTGGACAAGAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGt                                                                                                  <  3:13265/148‑1 (MQ=255)                                                   aGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTgg                                                                                                   <  6:177579/145‑1 (MQ=255)                                                   aGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTgg                                                                                                   >  5:177579/1‑145 (MQ=255)                                                               tCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAgcagca                                                                                    >  7:259774/1‑148 (MQ=255)                                                                           gACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTtg                                                                         <  8:259774/147‑1 (MQ=255)                                                                            acaacaAGCCGCCTGGGGCCATGATCGCCTTGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTtgat                                                                       <  2:49219/148‑1 (MQ=255)                                                                                    ccgccTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCa                                                               >  3:71126/1‑148 (MQ=255)                                                                                     cgccTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCGTTGATGATCTGCa                                                               >  6:250349/1‑147 (MQ=255)                                                                                       ccTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCAcc                                                             >  3:76962/1‑147 (MQ=255)                                                                                              ccATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAggtggt                                                     >  2:153481/1‑148 (MQ=255)                                                                                                 tGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATc                                                                   >  1:139702/1‑131 (MQ=255)                                                                                                 tGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATc                                                                   <  2:139702/131‑1 (MQ=255)                                                                                                     cGCCTGGCCCTTGGCATGCACGGCCACCGCACTGTCAAAAATGGCCT‑CGGTGCAGAAGCCGAAGAGCTTGAGCACCATGAAGGCCAAGAAACTCGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAg                                               >  7:116484/1‑147 (MQ=255)                                                                                                           gCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCa                                        <  3:160125/148‑1 (MQ=255)                                                                                                            cccTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCAc                                       >  4:271215/1‑148 (MQ=255)                                                                                                              cTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCAc                                       >  6:46230/1‑146 (MQ=255)                                                                                                                 ggCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCATGCTCGCCAccacc                                   <  3:98309/147‑4 (MQ=255)                                                                                                                  gCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGa                                    <  5:189167/145‑1 (MQ=255)                                                                                                                   cATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAgg                                 <  5:46230/147‑1 (MQ=255)                                                                                                                   cATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGt                                >  7:128857/1‑148 (MQ=255)                                                                                                                   cATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGt                                <  2:58819/148‑1 (MQ=255)                                                                                                                    aTGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACTGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGt                                >  3:255888/1‑147 (MQ=255)                                                                                                                    aTGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTg                               <  1:24382/148‑1 (MQ=255)                                                                                                                    aTGCACGGCCAACGCAAGTGCAAACCTGGCCTCCGGTG‑TGTAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTg                               <  8:230769/148‑1 (MQ=38)                                                                                                                       cACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGAc                             <  1:213613/147‑1 (MQ=255)                                                                                                                                 gCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCa                  <  4:76962/148‑1 (MQ=255)                                                                                                                                        cAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCAc           >  4:270381/1‑148 (MQ=255)                                                                                                                                                 ccT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAg  <  8:91926/148‑1 (MQ=255)                                                                                                                                                  cT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCa   >  6:182980/1‑146 (MQ=255)                                                                                                                                                   |                                                                                                                                                   GCATCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAG  >  NC_002947/3708114‑3708405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.