New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3708260	38 (0.660)	3 (0.060)	3/266	5.7	7.0%	coding (614/1563 nt)	actP‑III	acetate permease
	?	NC_002947	= 3708293	44 (0.810)					coding (581/1563 nt)	actP‑III	acetate permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCACGGCGTACAGGTAGCTGATGC  >  NC_002947/3708157‑3708431                                                                                                                                          |                                                                                                                                           cAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGaaa                                                                                                                                 >  4:160125/1‑148 (MQ=255)   aaCCGAGGGGAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACt                                                                                                                               <  4:228215/148‑1 (MQ=255)      cGAGGGAAATGGCGTCCACCGGGTTGGACAAGAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGt                                                                                                                            <  3:13265/148‑1 (MQ=255)        aGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTgg                                                                                                                             >  5:177579/1‑145 (MQ=255)        aGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTgg                                                                                                                             <  6:177579/145‑1 (MQ=255)                    tCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAgcagca                                                                                                              >  7:259774/1‑148 (MQ=255)                                gACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTtg                                                                                                   <  8:259774/147‑1 (MQ=255)                                 acaacaAGCCGCCTGGGGCCATGATCGCCTTGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTtgat                                                                                                 <  2:49219/148‑1 (MQ=255)                                         ccgccTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCa                                                                                         >  3:71126/1‑148 (MQ=255)                                          cgccTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCGTTGATGATCTGCa                                                                                         >  6:250349/1‑147 (MQ=255)                                            ccTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCAcc                                                                                       >  3:76962/1‑147 (MQ=255)                                                   ccATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAggtggt                                                                               >  2:153481/1‑148 (MQ=255)                                                      tGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATc                                                                                             >  1:139702/1‑131 (MQ=255)                                                      tGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATc                                                                                             <  2:139702/131‑1 (MQ=255)                                                          cGCCTGGCCCTTGGCATGCACGGCCACCGCACTGTCAAAAATGGCCT‑CGGTGCAGAAGCCGAAGAGCTTGAGCACCATGAAGGCCAAGAAACTCGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAg                                                                         >  7:116484/1‑147 (MQ=255)                                                                gCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCa                                                                  <  3:160125/148‑1 (MQ=255)                                                                 cccTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCAc                                                                 >  4:271215/1‑148 (MQ=255)                                                                   cTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCAc                                                                 >  6:46230/1‑146 (MQ=255)                                                                      ggCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCATGCTCGCCAccacc                                                             <  3:98309/147‑4 (MQ=255)                                                                       gCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGa                                                              <  5:189167/145‑1 (MQ=255)                                                                        cATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAgg                                                           <  5:46230/147‑1 (MQ=255)                                                                        cATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGt                                                          <  2:58819/148‑1 (MQ=255)                                                                        cATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGt                                                          >  7:128857/1‑148 (MQ=255)                                                                         aTGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACTGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGt                                                          >  3:255888/1‑147 (MQ=255)                                                                         aTGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTg                                                         <  1:24382/148‑1 (MQ=255)                                                                         aTGCACGGCCAACGCAAGTGCAAACCTGGCCTCCGGTG‑TGTAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTg                                                         <  8:230769/148‑1 (MQ=38)                                                                            cACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGAc                                                       <  1:213613/147‑1 (MQ=255)                                                                                      gCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCa                                            <  4:76962/148‑1 (MQ=255)                                                                                             cAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCAc                                     >  4:270381/1‑148 (MQ=255)                                                                                                      ccT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAg                            <  8:91926/148‑1 (MQ=255)                                                                                                       cT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCa                             >  6:182980/1‑146 (MQ=255)                                                                                                             tGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCa                                         >  4:44781/1‑129 (MQ=255)                                                                                                             tGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCa                                         <  3:44781/129‑1 (MQ=255)                                                                                                               cTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCACgg                    <  1:288830/148‑1 (MQ=255)                                                                                                                 gAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCAc                      <  2:283519/144‑1 (MQ=255)                                                                                                                 gAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCAc                      >  1:283519/1‑144 (MQ=255)                                                                                                                    gCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCACGGCGTAc               <  3:270381/148‑1 (MQ=255)                                                                                                                     ccGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCACgg                    >  7:12329/1‑142 (MQ=255)                                                                                                                     ccGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCACgg                    <  8:12329/142‑1 (MQ=255)                                                                                                                      cGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCACGGCGTACAg             >  8:115937/1‑148 (MQ=255)                                                                                                                         aGTGCTTGAGGACGATGATGGTCATGAAACTGGTGCCTGATTGCATGATTTCCGCCTTGATGATCTGTTCCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACGAGCATCACGGCGTACATGTa          <  8:116484/148‑1 (MQ=255)                                                                                                                         aGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCACGGCGTACAgg            >  1:29327/1‑146 (MQ=255)                                                                                                                                 aGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCCCCCCGACCAGCATCACGGCGTACAGGTAGCTGATGc  >  3:92687/1‑148 (MQ=255)                                                                                                                                  gCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCACGGCGTACAGGTAGCTGATGc  <  1:153481/147‑1 (MQ=255)                                                                                                                                          |                                                                                                                                           CAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑CGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATCACGGCGTACAGGTAGCTGATGC  >  NC_002947/3708157‑3708431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.