| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 3,788,572 | Δ23 bp | coding (41‑63/1392 nt) | PP_3350 ← | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3788571 | 2 (0.030) | 39 (0.690) | 36/280 | 0.7 | 95.1% | coding (64/1392 nt) | PP_3350 | hypothetical protein |
| ? | NC_002947 | 3788595 = | 2 (0.040) | coding (40/1392 nt) | PP_3350 | hypothetical protein | |||||
GCCAGGCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGC > NC_002947/3788424‑3788716 | gCCAGGCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTA < 1:316360‑M1/148‑1 (MQ=255) ggCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAcca < 6:132793‑M1/147‑4 (MQ=255) aCAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcag < 8:249117‑M1/146‑14 (MQ=255) aGCCGATGTTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggca < 5:250739‑M1/147‑17 (MQ=255) cAGGCCATCGATAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacgg < 4:70171‑M1/148‑32 (MQ=255) tCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgat > 8:272425‑M1/1‑110 (MQ=255) aaaGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCCGTAGTCCTCGATCCAGCGAGGGCCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAcaaagcggggcaggaataccccgttcaacggctggatcat > 7:262730‑M1/1‑107 (MQ=255) gTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgtt < 3:22355‑M1/123‑26 (MQ=255) gTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgtt > 4:22355‑M1/1‑98 (MQ=255) tGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttccc < 3:255868‑M1/148‑52 (MQ=255) ggCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttccct > 4:192901‑M1/1‑96 (MQ=255) ggTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttt > 8:202654‑M1/1‑85 (MQ=255) aaaGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgagcggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgt > 8:128419‑M1/1‑75 (MQ=255) ggTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttac < 8:171324‑M1/148‑79 (MQ=255) tAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaatggcttgatcatcagaatttcccttcacttgtttttataattgttcttac > 5:324730‑M1/1‑68 (MQ=255) tCCTCGATCCAGCGAGGGTCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaact < 1:180043‑M1/148‑84 (MQ=255) ccTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactg < 4:208039‑M1/148‑85 (MQ=255) ccTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCGCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaact < 5:121826‑M1/147‑84 (MQ=255) aTCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataa > 4:222712‑M1/1‑59 (MQ=255) aGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTGTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAAt > 1:220006/1‑148 (MQ=255) aGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttatatttgttcttacaaactggataactctgtta < 1:29802‑M1/148‑98 (MQ=255) ggCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaac > 1:187402‑M1/1‑48 (MQ=255) ggCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaa > 6:102690‑M1/1‑48 (MQ=255) ccccTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcaattgtttttataattgttcttacaaactggataactctgttaacgat > 2:257596‑M1/1‑46 (MQ=255) ccTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattattttt > 8:97439‑M1/1‑39 (MQ=255) tCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgt > 3:51852‑M1/1‑37 (MQ=255) ccccGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgt > 1:284326‑M1/1‑36 (MQ=255) cccGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgt < 4:186343‑M1/146‑112 (MQ=255) cggccggcTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccgtcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaa > 5:51819‑M1/1‑33 (MQ=255) gccggcTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttata > 6:267341‑M1/1‑31 (MQ=255) gccggcTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttata < 5:267341‑M1/98‑68 (MQ=255) gccggcTCTCT‑TCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTg < 2:220006/148‑1 (MQ=255) cggcTCTCT‑TCAAGCGGGCTGGCCGCGTAccatgagggtcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccata < 7:109188‑M1/148‑120 (MQ=255) ctctct‑TCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatg < 6:129133‑M1/147‑122 (MQ=255) aGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtca > 6:89861‑M1/1‑17 (MQ=255) cGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaatag > 7:205758‑M1/1‑15 (MQ=255) gCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaatagcgt < 7:97439‑M1/148‑137 (MQ=255) ccGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaatagcgttttgc < 3:192901‑M1/148‑142 (MQ=255) ccGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatacgcgccgtcaatagcgttttgc < 7:202654‑M1/148‑142 (MQ=255) gcgTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaatagcgttttgccg < 7:128419‑M1/148‑144 (MQ=255) tAccatgaggggcaggcataccccgttcaatggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaatagcgttttgccgtg < 6:324730‑M1/147‑146 (MQ=255) tAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaatagcgttttgccgtg > 8:171724‑M1/1‑2 (MQ=255) | GCCAGGCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGC > NC_002947/3788424‑3788716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |