| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 3,788,572 | Δ23 bp | coding (41‑63/1392 nt) | PP_3350 ← | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3788571 | 2 (0.030) | 39 (0.690) | 36/280 | 0.7 | 95.1% | coding (64/1392 nt) | PP_3350 | hypothetical protein |
| ? | NC_002947 | 3788595 = | 2 (0.040) | coding (40/1392 nt) | PP_3350 | hypothetical protein | |||||
GCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTG > NC_002947/3788452‑3788739 | ggccgactctgacagccgatggtagcgcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCa < 6:132793‑M2/3‑1 (MQ=255) acagccgatggtagcgcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGggcag < 8:249117‑M2/13‑1 (MQ=255) agccgatgttagcgcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGggcaggca < 5:250739‑M2/16‑1 (MQ=255) caggccatcgataggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACgg < 4:70171‑M2/31‑1 (MQ=255) tcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGat > 8:272425‑M2/111‑147 (MQ=255) aaaggggcagtggccttggcggggtcgtcgagaaagccgtagtcctcgatccagcgagggccccctggcctccccggccggctctcttcaagcgggctggccgcgtaCAAAGCGGGGCAGGAATACCCCGTTCAACGGCTGGatcat > 7:262730‑M2/108‑147 (MQ=255) gtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGtt < 3:22355‑M2/25‑1 (MQ=255) gtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGtt > 4:22355‑M2/99‑123 (MQ=255) tggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTccc < 3:255868‑M2/51‑1 (MQ=255) ggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCt > 4:192901‑M2/97‑148 (MQ=255) ggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGtttt > 8:202654‑M2/86‑148 (MQ=255) aGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTGTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAAt > 1:220006/1‑148 (MQ=255) aaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGCGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGt > 8:128419‑M2/76‑147 (MQ=255) ggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTAc < 8:171324‑M2/78‑1 (MQ=255) tagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAATGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTAc > 5:324730‑M2/69‑146 (MQ=255) tcctcgatccagcgagggtcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACt < 1:180043‑M2/83‑1 (MQ=255) cctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTg < 4:208039‑M2/84‑1 (MQ=255) cctcgatccagcgaggggcccctggcctccccggccggcgctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACt < 5:121826‑M2/83‑1 (MQ=255) atccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATaa > 4:222712‑M2/60‑148 (MQ=255) gccggcTCTCT‑TCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTg < 2:220006/148‑1 (MQ=255) aggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATATTTGTTCTTACAAACTGGATAACTCTGTTa < 1:29802‑M2/97‑1 (MQ=255) ggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTaa > 6:102690‑M2/49‑146 (MQ=255) ggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAAc > 1:187402‑M2/49‑147 (MQ=255) cccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCAATTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGat > 2:257596‑M2/47‑148 (MQ=255) cctccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTAttttt > 8:97439‑M2/40‑148 (MQ=255) tccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGt > 3:51852‑M2/38‑148 (MQ=255) ccccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGt > 1:284326‑M2/37‑147 (MQ=255) cccggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGt < 4:186343‑M2/111‑1 (MQ=255) cggccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCGTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTaa > 5:51819‑M2/34‑147 (MQ=255) gccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTtata < 5:267341‑M2/67‑1 (MQ=255) gccggctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTtata > 6:267341‑M2/32‑98 (MQ=255) cggctctcttcaagcgggctggccgcgtaCCATGAGGGTCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCata < 7:109188‑M2/119‑1 (MQ=255) ctctcttcaagcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATg < 6:129133‑M2/121‑1 (MQ=255) agcgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCa > 6:89861‑M2/18‑146 (MQ=255) cgggctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAg > 7:205758‑M2/16‑148 (MQ=255) gctggccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGt < 7:97439‑M2/136‑1 (MQ=255) ccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGc < 3:192901‑M2/141‑1 (MQ=255) ccgcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATACGCGCCGTCAATAGCGTTTTGc < 7:202654‑M2/141‑1 (MQ=255) gcgtaCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCg < 7:128419‑M2/143‑1 (MQ=255) taCCATGAGGGGCAGGCATACCCCGTTCAATGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCgtg < 6:324730‑M2/145‑1 (MQ=255) taCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCgtg > 8:171724‑M2/3‑147 (MQ=255) | GCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCT‑TCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTG > NC_002947/3788452‑3788739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |