| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4808174 = | 2 (0.030) | 17 (0.400) | 12/212 | 2.3 | 54.4% | intergenic (‑283/‑272) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | NC_002947 | = 5988935 | 27 (0.630) | intergenic (+229/‑317) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
TCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGA‑‑‑‑GCCC‑CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTA > NC_002947/5988788‑5989077 | tCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGA‑‑‑‑CCGC‑CTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGACTGGTGGAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAc > 7:219508/1‑148 (MQ=11) cGTTTGTTTCGGGCCATTTATTCCTGTGGGACGCGCAAGCGATCCTACCCACCTGGCGCACGCCTCGATATCGCGTCGTACAAACAACGCGGT‑CGCGCGCTCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTa < 1:111269/148‑1 (MQ=255) tttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGA‑‑‑‑GCCC‑CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcga < 7:269750‑M2/148‑8 (MQ=255) tgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGA‑‑‑‑GCCC‑CCGGCGGCAGGCCTCTATATCGCTTCTTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGTATTGGCCAGAAACAAACGTAGTAGCGGGTTTAcccgcga > 6:263051‑M2/1‑139 (MQ=255) tCCTGCGGGATTTGCGCGCGA‑‑‑‑CCGC‑CTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCt > 7:150316/1‑148 (MQ=14) gtgGGACGCGCACGCGA‑‑‑‑GCCC‑CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctc < 1:262938‑M2/147‑29 (MQ=255) gtgGGACGCGCACGCGA‑‑‑‑GCCC‑CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcga < 1:50628‑M2/148‑31 (MQ=255) tgGGACGCGCACGCGA‑‑‑‑GCCC‑CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGACACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcga < 5:138533‑M2/147‑31 (MQ=255) gACGCGCACGCGA‑‑‑‑GCCC‑CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatc < 5:7107‑M2/146‑33 (MQ=255) cgcgA‑‑‑‑GCCC‑CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgcgc > 4:38987/1‑148 (MQ=255) cgcgA‑‑‑‑GCCC‑CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTAGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgcg > 6:325573/1‑147 (MQ=255) accgc‑cttgggGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaa < 2:15927‑M2/143‑47 (MQ=255) ccc‑ccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCaaaa < 2:262938/148‑1 (MQ=255) ccc‑ccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCaaaa < 2:50628/148‑1 (MQ=255) gc‑cttGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAAAGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggctctgaaaat < 6:264173‑M2/146‑50 (MQ=255) cTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTa > 7:207485/1‑148 (MQ=255) gtctcGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaaca < 8:233809‑M2/146‑63 (MQ=255) gATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTg > 3:113060/1‑148 (MQ=255) atatCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACACACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTCTCGCCAGGCACCt > 6:234807/1‑146 (MQ=255) cgcgTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGc > 3:285632/1‑148 (MQ=255) gcgTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCGGCAAGc > 2:296574/1‑147 (MQ=255) cgtcgtACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCa < 7:57541/148‑1 (MQ=255) acaaacaaGGCGGT‑CGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaa < 7:219413‑M2/137‑70 (MQ=255) acaaacaaGGCGGT‑CGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaa > 8:219413‑M2/1‑68 (MQ=255) caaacaaGGCGGT‑CGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccg < 8:171791‑M2/148‑82 (MQ=255) acaaGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAAtt > 2:329265/1‑148 (MQ=255) aGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAACCTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTcc > 7:240475/1‑148 (MQ=255) aGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTcc > 1:188661/1‑148 (MQ=255) gCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTg < 4:285632/148‑1 (MQ=255) cGGT‑CGCGCGCGCCTGGCACAGGAGGGATTAGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTg < 5:325573/147‑1 (MQ=255) gcgcgcgaCTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaatt > 7:233809‑M2/1‑53 (MQ=255) tGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTcgcc < 6:11852/147‑1 (MQ=255) gCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCgccgcc < 8:207485/148‑1 (MQ=255) gCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCgccgcc < 2:259294/148‑1 (MQ=255) aggaggGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctggatctcacaggcgctgaaaatcctccggcaaacccctccaaattccaccggcgtcgcctccaaattccaccgccgcccccgc < 2:308248‑M2/148‑111 (MQ=255) gaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATAACAGCGCCGCCATGAc > 6:170648/1‑147 (MQ=255) gaggGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgccgccccctca < 3:242638‑M2/147‑112 (MQ=255) aggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcgc > 4:91739/1‑148 (MQ=255) aggGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgccgccccctca < 6:25842‑M2/146‑112 (MQ=255) aggGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgct > 6:80596‑M2/1‑35 (MQ=255) aggGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgct < 5:80596‑M2/62‑28 (MQ=255) actggCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgccgccccctcaaaatt > 5:25842‑M2/3‑31 (MQ=255) ggCCAGAAACAAACGTAGGAGCGTGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTc < 3:38987/147‑1 (MQ=255) gccgaaaCAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacagacgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgccgccccctcaaaattccaa > 7:96548‑M2/4‑27 (MQ=255) ccAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTcgc > 1:145236/1‑128 (MQ=255) ccAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTcgc < 2:145236/128‑1 (MQ=255) ccAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTcac > 7:180769/1‑147 (MQ=255) cgaAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcccaggcgctgaaactctcccggcgaacacctcc < 7:71558‑M2/91‑68 (MQ=255) cgaAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcccaggcgctgaaactctcccggcgaacacctcc > 8:71558‑M2/2‑25 (MQ=255) acaaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAAc > 3:220915/1‑147 (MQ=255) aacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCAt > 7:11375/1‑147 (MQ=255) aGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgccgccccctcaaaattccaacgccgcctcccctcgaaa > 1:15927‑M2/1‑10 (MQ=255) gCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGt < 1:329265/148‑1 (MQ=255) cGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcactgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgccgcaccctcaaaattccaactccgcctcccctcgaaaat < 7:89572‑M2/148‑141 (MQ=255) ggTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgccgccccctcaaaattccaacgccgcctcccctcgaaaatcc > 4:242638‑M2/1‑6 (MQ=255) | TCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGA‑‑‑‑GCCC‑CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGT‑CGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTA > NC_002947/5988788‑5989077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |