New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5264837 =	67 (1.170)	3 (0.060)	3/268	5.7	4.9%	coding (1775/2067 nt)	yjiY	putative transporter
	?	NC_002947	5264917 =	53 (0.970)					coding (1695/2067 nt)	yjiY	putative transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCTTGGCCAAGGCCAGGAAGCCGACAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCCCCAGAGCGCCACGCAGCCAGCAGTGGCAAG  >  NC_002947/5264772‑5265060                                                                                                                                                   |                                                                                                                                                tcttGGCCAAGGCCAGGAAGCCGACAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAg                                                                                                                                                >  7:149349/1‑147 (MQ=255)       ccAAGGCCAGGAAGCCGACAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGCAAACCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTAcc                                                                                                                                            >  1:254999/1‑146 (MQ=255)         aaGGCCAGGAAGCCGACAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCa                                                                                                                                       >  2:7978/1‑148 (MQ=255)          aGGCCAGGAAGCCGACAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGt                                                                                                                                               <  8:28129/139‑1 (MQ=255)          aGGCCAGGAAGCCGACAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGt                                                                                                                                               >  7:28129/1‑139 (MQ=255)              cAGGAAGCCGACAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAg                                                                                                                                  <  3:278420/148‑1 (MQ=255)               aGGAAGCCGACAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAg                                                                                                                                  <  5:312437/147‑1 (MQ=255)                    gCCGACAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATa                                                                                                                            <  7:24244/148‑1 (MQ=255)                        aCAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCgg                                                                                                                        >  2:183947/1‑148 (MQ=255)                          aGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGcc                                                                                                                      <  2:254999/148‑1 (MQ=255)                           gCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCTTCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGcc                                                                                                                      <  5:213317/147‑1 (MQ=255)                               ggTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCa                                                                                                                  >  5:280741/1‑147 (MQ=255)                                 ttGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCt                                                                                                               >  2:207566/1‑148 (MQ=255)                                      gTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGtt                                                                                                           <  6:280741/147‑1 (MQ=255)                                      gTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTg                                                                                                          >  8:3825/1‑148 (MQ=255)                                       tCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGtt                                                                                                           >  5:178744/1‑146 (MQ=255)                                          aaCAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGgag                                                                                                       <  5:284598/147‑1 (MQ=255)                                           aCAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGgaga                                                                                                      >  8:105237/1‑147 (MQ=255)                                                     cAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGc                                                                                           >  3:224303/1‑148 (MQ=255)                                                      aGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCg                                                                                          >  1:101854/1‑148 (MQ=255)                                                       ggCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTTCCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCgg                                                                                         >  7:272862/1‑148 (MQ=255)                                                         ccTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCgg                                                                                         >  5:160145/1‑146 (MQ=255)                                                         ccTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCgg                                                                                         >  5:181152/1‑146 (MQ=255)                                                          cTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCca                                                                                      <  3:317849/148‑1 (MQ=255)                                                             c‑AGCCGTGGTGCAGATCTGGAGCCATACGGCCGGCAGCAGGGTGACAGAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAg                                                                                   <  7:220094/148‑1 (MQ=255)                                                             c‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCcac                                                                                     <  8:149349/146‑1 (MQ=255)                                                               aGCAGTTGTGCAGATCAGAATCCATACGGCCGTCAGCAGGTTGACCCAGATGTAGCGCTGACGCTTCATATTGATCAGCACCACAGTACCGAGCATCAATGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCcaca                                                                                    <  5:259359/146‑1 (MQ=255)                                                                  cGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGgtg                                                                               >  2:102552/1‑148 (MQ=255)                                                                  cGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGgtg                                                                               <  1:207566/148‑1 (MQ=255)                                                                             tCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCAcc                                                                    >  1:13355/1‑148 (MQ=255)                                                                                 cagcCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAg                                                                 >  5:126785/1‑147 (MQ=255)                                                                                       tACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTc                                                           >  3:62686/1‑147 (MQ=255)                                                                                               gcagcaGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGcc                                                  <  2:101854/148‑1 (MQ=255)                                                                                                   cagGTTGACCGAGATGTAGCGCTGACTCTTCATCTTGATCAGCACCACATTACCGAGCATCAAGGCGATACCGGCGAGCATCTTGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTg                                               <  6:192247/147‑1 (MQ=255)                                                                                                   cagGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACACCCTgg                                              <  4:224303/148‑1 (MQ=255)                                                                                                       gTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTa                                            >  2:64180/1‑146 (MQ=255)                                                                                                        tGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTAcag                                         <  1:183947/148‑1 (MQ=255)                                                                                                         gACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTAcag                                         <  6:126785/147‑1 (MQ=255)                                                                                                          aCCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCATCGGGTCGATGACGCCCTGGTAcagc                                        <  1:7978/147‑1 (MQ=255)                                                                                                           cccAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTAcagcag                                      <  7:3825/148‑1 (MQ=255)                                                                                                             cAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCg                                                               >  4:114477/1‑121 (MQ=255)                                                                                                             cAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCg                                                               <  3:114477/121‑1 (MQ=255)                                                                                                                    aGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGccc                               <  5:53774/146‑1 (MQ=255)                                                                                                                    aGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGAGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGcc                                >  5:287408/1‑145 (MQ=255)                                                                                                                       gcTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCACCaga                           >  6:288017/1‑147 (MQ=255)                                                                                                                           aCGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCCCCAGAgct                        >  5:253941/1‑145 (MQ=255)                                                                                                                             gCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCCCCAGAGCGCCAc                    >  1:318467/1‑148 (MQ=255)                                                                                                                                tCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCCCCAGAGCGCCAc                    >  5:234078/1‑145 (MQ=255)                                                                                                                                  aTCTTGATCAGCACCACAGTACCGAGTATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCCCCAGAGCGCCACGcagc               >  4:254280/1‑148 (MQ=255)                                                                                                                                   tCTTGATCAGCCCCACAGTACCGAGCATCAAGGCGATACCGGCAAGCATCTGGTTGGAGATACAAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATCACGCCCTGGTACAGCAGATAGCACCAGAGCCCCACGcag                >  5:48602/1‑146 (MQ=255)                                                                                                                                   tCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACTGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCCCCAGAGCGCCACGcag                <  6:178744/146‑1 (MQ=255)                                                                                                                                     ttGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCCCCAGAGCGCCACGcagccag            >  8:306917/1‑148 (MQ=255)                                                                                                                                      tGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCCCCAGAGCGCCACGcagccag            >  1:50996/1‑147 (MQ=255)                                                                                                                                                 acaGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCCCCAGAGCGCCACGCAGCCAGCAGTGGCAAg  >  7:68297/1‑146 (MQ=255)                                                                                                                                                   |                                                                                                                                                TCTTGGCCAAGGCCAGGAAGCCGACAGCCGGGTTGGGGTCGAACAGCTTGATCAGGCCTGC‑AGCCGTGGTGCAGATCAGCAGCCATACGGCCGGCAGCAGGGTGACCCAGATGTAGCGCTGACGCTTCATCTTGATCAGCACCACAGTACCGAGCATCAAGGCGATACCGGCCAGCATCTGGTTGGAGATACCAAACAGCGGCCACAGGGTGTTGATGCCACCCAGCGGGTCGATGACGCCCTGGTACAGCAGATAGCCCCAGAGCGCCACGCAGCCAGCAGTGGCAAG  >  NC_002947/5264772‑5265060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.